| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606444
Identifier: 86606444
GI number: 86606444
Start: 1790928
End: 1792973
Strand: Reverse
Name: 86606444
Synonym: CYA_1791
Alternate gene names: NA
Gene position: 1792973-1790928 (Counterclockwise)
Preceding gene: 86606445
Following gene: 86606443
Centisome position: 61.14
GC content: 67.2
Gene sequence:
>2046_bases ATGGCCAATGCCAGTAGCGCGCAAGGCAAGCAACAGGATGGGAGGCAGGGGGGCCTGGTCCGCCTGGGGATCGACGTGGG AGGCACCTTCACGGATCTGGTGCTCCTCCAGGAAGGCCAGATCCGGACAGCCAAGGTGCTCTCCACCCCCAGCCCAGAAG CGGGGGTCTTTGGCGCCCTGGACAAGCTGGGCCCAGTTGAGGTGGACGTGTTCTGCCACGGCATGACGGTGGCCACCAAC GCCCTCTTGGAGCGCAAGGGATCCCCCACCCTGTTTCTGACCACGGCGGGCTTCCGGGATGTGCTGGCCATTGGTCGCCA AAACCGCCCTTCCCTTTACGACCTCACCCAGCCCAAGCCAGAGCCGGTGGTGCCCCGCCACCACTGCCTGGAGGTGAAGG AGCGCTGCAGCGCCGGCGGCGTGGTCGAGCCGCTGACGGAAGAGGAAATCCAGCGCGTCCTCCGGGAAGTGGGCGAGCGG GTAGAGCGGGATGGGATCCGTGCCGTGGGGGTGGGATTCTTGTTTTCTTTCCTCTACCCGGAGCACGAGCAGCGCCTGGG GGCGGCCCTGAGAGAGGCTTTCCCCGACTTGCATGTTTCCCTCTCCTGCGAAGTGGCGCCGGAGTTTCGGGAATACGAGC GCTTTAGCACCACGGCCATTGATGCCTACCTCAGCCCGGTGCTGGCGGGCTACCTGCACCGCTTGGCGCAGGGCTGCCGG CAGCGAGGGATCCCCGAACCCCTGATCATGCAATCCTCCGGCGGCGTCACTTCCATTGCCCAGGCAGCGGCTCATGCCTC GGTGGCGCTGCTTTCGGGGCCAGCGGGCGGCGTTTACGGGGCGGCCTACCTGGGCTGGCTGAGCGGCTATTCCCATCTGC TCAGCTTCGATATGGGGGGAACCAGTACCGATGTGGCCCTCATTCAAGACGGCCTCCCTCAGGTTACCCCGTCAGCGGTG GTGTGCGGCCTGCCGGTGCAACAGCCCCAGATCGACATCCATACCGTCAGCGCCGGGGGCGGATCCCTGGCCTCGCTGTT GCCGGGCGGGGGGCTGCAGGTGGGGCCGGAAAGTGCCGGCTCCAACCCTGGGCCGGCCTGCTACGGTCGGGGGGGAACGG CTCCCACGGTAACCGATGCCAACCTCTGGCTGGGCTACCTGCCGGATGGGGGCTGGCTGGGGGATGCCGTTTGCCTACGG CGGGACTTGGCCGGCCAGGCCATCGGAACGCTGGCGGAGCCCTTGGGTTTGACTTTGGAGGAGACGGCTGTTGGCATTCG CACCCTGGCCAATGTGGCCATGGCGCGGGCTTTGCGGGTCATCAGCGTGGAGCGGGGCTTGGATCCTGCCGATTTTGCCC TGTTGGCCTTTGGCGGAGCCGGGCCCATGCACGCCTGTGCCCTGGCGGAAGAGCTGGGGATCCGCCGCGTCCTCGTCCCA GCCTTTGCCGGTGTCCTCTCGGCTCTGGGTATGGCTTTGGCCGATCTGCGGCGGGACTACCGGCGGGCCATCCTGCAGCC GCTGCAACAGTTGGAGGGGGAAGGGGGAGGATCCCTTTTGGCCCAGTGGGCGGCGCCCCTCATCCGCCAGGCGCAAGCCG ACCTGCAGGAGCCGGGGCTCTCCTTCAGCCTCGACCTGCGCTACCGCGGCCAGTCTTTTGAGCTGGAGATCCCGGCCCAG TTGTCGGATCCGGTTTCTCTCTTGGAGCAGCGGTTTCACCAGGCCCACCGCCAGCGCTACGGCTGGCAGGATCCCGACCA AGAGGTGGAGGTGATCCAGCTGCGTCTGCGGGCGGTACAAGCTTTGCCCCCTGTGCCTTTAAAGGCGCCGCCCCCCCTGC CAGGGGATCCCTTCAAGGGGGAGCGCCAGGCCTGGACGGGCGGCCGGATGCGACCGGTCCCAGTCTACGATCGGCGGCGC ATGGGGGTGGGGTTTCAACTGGGCGGGCCAGCGATTGTGGAGATGCCGGAGGCTACCGTGGTGATCGAAGCCGGTTGGAC GGGCAATATCGACGCCGTGGGAACCCTAATCCTGAGCTGCGGGTGA
Upstream 100 bases:
>100_bases CTTTTGCAGCAGGAGCAACCCCTGGAAAGCAAGTCGGAAGAGGTGCCCCGGCCTCGTCTCTAGCGAGGGGTTGAGGCCTG CCCAAGGGTCTTATCGAGCC
Downstream 100 bases:
>100_bases TTCCGTTGCCAGGTGCGGCCCTCGGGAACCCTTCCTCAGCTTGGTTGCCAGCAGTTTTGCAAGGTTTTGAGGTTTTCTCT AAATTGGCAGGGCCCAGGTT
Product: hydantoin utilization protein A
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MANASSAQGKQQDGRQGGLVRLGIDVGGTFTDLVLLQEGQIRTAKVLSTPSPEAGVFGALDKLGPVEVDVFCHGMTVATN ALLERKGSPTLFLTTAGFRDVLAIGRQNRPSLYDLTQPKPEPVVPRHHCLEVKERCSAGGVVEPLTEEEIQRVLREVGER VERDGIRAVGVGFLFSFLYPEHEQRLGAALREAFPDLHVSLSCEVAPEFREYERFSTTAIDAYLSPVLAGYLHRLAQGCR QRGIPEPLIMQSSGGVTSIAQAAAHASVALLSGPAGGVYGAAYLGWLSGYSHLLSFDMGGTSTDVALIQDGLPQVTPSAV VCGLPVQQPQIDIHTVSAGGGSLASLLPGGGLQVGPESAGSNPGPACYGRGGTAPTVTDANLWLGYLPDGGWLGDAVCLR RDLAGQAIGTLAEPLGLTLEETAVGIRTLANVAMARALRVISVERGLDPADFALLAFGGAGPMHACALAEELGIRRVLVP AFAGVLSALGMALADLRRDYRRAILQPLQQLEGEGGGSLLAQWAAPLIRQAQADLQEPGLSFSLDLRYRGQSFELEIPAQ LSDPVSLLEQRFHQAHRQRYGWQDPDQEVEVIQLRLRAVQALPPVPLKAPPPLPGDPFKGERQAWTGGRMRPVPVYDRRR MGVGFQLGGPAIVEMPEATVVIEAGWTGNIDAVGTLILSCG
Sequences:
>Translated_681_residues MANASSAQGKQQDGRQGGLVRLGIDVGGTFTDLVLLQEGQIRTAKVLSTPSPEAGVFGALDKLGPVEVDVFCHGMTVATN ALLERKGSPTLFLTTAGFRDVLAIGRQNRPSLYDLTQPKPEPVVPRHHCLEVKERCSAGGVVEPLTEEEIQRVLREVGER VERDGIRAVGVGFLFSFLYPEHEQRLGAALREAFPDLHVSLSCEVAPEFREYERFSTTAIDAYLSPVLAGYLHRLAQGCR QRGIPEPLIMQSSGGVTSIAQAAAHASVALLSGPAGGVYGAAYLGWLSGYSHLLSFDMGGTSTDVALIQDGLPQVTPSAV VCGLPVQQPQIDIHTVSAGGGSLASLLPGGGLQVGPESAGSNPGPACYGRGGTAPTVTDANLWLGYLPDGGWLGDAVCLR RDLAGQAIGTLAEPLGLTLEETAVGIRTLANVAMARALRVISVERGLDPADFALLAFGGAGPMHACALAEELGIRRVLVP AFAGVLSALGMALADLRRDYRRAILQPLQQLEGEGGGSLLAQWAAPLIRQAQADLQEPGLSFSLDLRYRGQSFELEIPAQ LSDPVSLLEQRFHQAHRQRYGWQDPDQEVEVIQLRLRAVQALPPVPLKAPPPLPGDPFKGERQAWTGGRMRPVPVYDRRR MGVGFQLGGPAIVEMPEATVVIEAGWTGNIDAVGTLILSCG >Mature_680_residues ANASSAQGKQQDGRQGGLVRLGIDVGGTFTDLVLLQEGQIRTAKVLSTPSPEAGVFGALDKLGPVEVDVFCHGMTVATNA LLERKGSPTLFLTTAGFRDVLAIGRQNRPSLYDLTQPKPEPVVPRHHCLEVKERCSAGGVVEPLTEEEIQRVLREVGERV ERDGIRAVGVGFLFSFLYPEHEQRLGAALREAFPDLHVSLSCEVAPEFREYERFSTTAIDAYLSPVLAGYLHRLAQGCRQ RGIPEPLIMQSSGGVTSIAQAAAHASVALLSGPAGGVYGAAYLGWLSGYSHLLSFDMGGTSTDVALIQDGLPQVTPSAVV CGLPVQQPQIDIHTVSAGGGSLASLLPGGGLQVGPESAGSNPGPACYGRGGTAPTVTDANLWLGYLPDGGWLGDAVCLRR DLAGQAIGTLAEPLGLTLEETAVGIRTLANVAMARALRVISVERGLDPADFALLAFGGAGPMHACALAEELGIRRVLVPA FAGVLSALGMALADLRRDYRRAILQPLQQLEGEGGGSLLAQWAAPLIRQAQADLQEPGLSFSLDLRYRGQSFELEIPAQL SDPVSLLEQRFHQAHRQRYGWQDPDQEVEVIQLRLRAVQALPPVPLKAPPPLPGDPFKGERQAWTGGRMRPVPVYDRRRM GVGFQLGGPAIVEMPEATVVIEAGWTGNIDAVGTLILSCG
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=730, Percent_Identity=34.1095890410959, Blast_Score=250, Evalue=3e-66, Organism=Caenorhabditis elegans, GI133901900, Length=719, Percent_Identity=29.9026425591099, Blast_Score=233, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6322634, Length=640, Percent_Identity=33.59375, Blast_Score=264, Evalue=4e-71, Organism=Drosophila melanogaster, GI45550492, Length=741, Percent_Identity=33.7381916329285, Blast_Score=290, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.14
Molecular weight: Translated: 72226; Mature: 72094
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANASSAQGKQQDGRQGGLVRLGIDVGGTFTDLVLLQEGQIRTAKVLSTPSPEAGVFGAL CCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHH DKLGPVEVDVFCHGMTVATNALLERKGSPTLFLTTAGFRDVLAIGRQNRPSLYDLTQPKP HCCCCEEEEEEECCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCEECCCCCC EPVVPRHHCLEVKERCSAGGVVEPLTEEEIQRVLREVGERVERDGIRAVGVGFLFSFLYP CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC EHEQRLGAALREAFPDLHVSLSCEVAPEFREYERFSTTAIDAYLSPVLAGYLHRLAQGCR HHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRGIPEPLIMQSSGGVTSIAQAAAHASVALLSGPAGGVYGAAYLGWLSGYSHLLSFDMGG HCCCCCCEEEECCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCC TSTDVALIQDGLPQVTPSAVVCGLPVQQPQIDIHTVSAGGGSLASLLPGGGLQVGPESAG CCCCHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCEECCCCCC SNPGPACYGRGGTAPTVTDANLWLGYLPDGGWLGDAVCLRRDLAGQAIGTLAEPLGLTLE CCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH ETAVGIRTLANVAMARALRVISVERGLDPADFALLAFGGAGPMHACALAEELGIRRVLVP HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHCCHHHHHH AFAGVLSALGMALADLRRDYRRAILQPLQQLEGEGGGSLLAQWAAPLIRQAQADLQEPGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SFSLDLRYRGQSFELEIPAQLSDPVSLLEQRFHQAHRQRYGWQDPDQEVEVIQLRLRAVQ EEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ALPPVPLKAPPPLPGDPFKGERQAWTGGRMRPVPVYDRRRMGVGFQLGGPAIVEMPEATV HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCEEE VIEAGWTGNIDAVGTLILSCG EEECCCCCCHHHHHHHHEECC >Mature Secondary Structure ANASSAQGKQQDGRQGGLVRLGIDVGGTFTDLVLLQEGQIRTAKVLSTPSPEAGVFGAL CCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHH DKLGPVEVDVFCHGMTVATNALLERKGSPTLFLTTAGFRDVLAIGRQNRPSLYDLTQPKP HCCCCEEEEEEECCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCEECCCCCC EPVVPRHHCLEVKERCSAGGVVEPLTEEEIQRVLREVGERVERDGIRAVGVGFLFSFLYP CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC EHEQRLGAALREAFPDLHVSLSCEVAPEFREYERFSTTAIDAYLSPVLAGYLHRLAQGCR HHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRGIPEPLIMQSSGGVTSIAQAAAHASVALLSGPAGGVYGAAYLGWLSGYSHLLSFDMGG HCCCCCCEEEECCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCC TSTDVALIQDGLPQVTPSAVVCGLPVQQPQIDIHTVSAGGGSLASLLPGGGLQVGPESAG CCCCHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCEECCCCCC SNPGPACYGRGGTAPTVTDANLWLGYLPDGGWLGDAVCLRRDLAGQAIGTLAEPLGLTLE CCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH ETAVGIRTLANVAMARALRVISVERGLDPADFALLAFGGAGPMHACALAEELGIRRVLVP HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHCCHHHHHH AFAGVLSALGMALADLRRDYRRAILQPLQQLEGEGGGSLLAQWAAPLIRQAQADLQEPGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SFSLDLRYRGQSFELEIPAQLSDPVSLLEQRFHQAHRQRYGWQDPDQEVEVIQLRLRAVQ EEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ALPPVPLKAPPPLPGDPFKGERQAWTGGRMRPVPVYDRRRMGVGFQLGGPAIVEMPEATV HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCEEE VIEAGWTGNIDAVGTLILSCG EEECCCCCCHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]