| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606445
Identifier: 86606445
GI number: 86606445
Start: 1793011
End: 1794354
Strand: Reverse
Name: 86606445
Synonym: CYA_1792
Alternate gene names: NA
Gene position: 1794354-1793011 (Counterclockwise)
Preceding gene: 86606446
Following gene: 86606444
Centisome position: 61.18
GC content: 61.53
Gene sequence:
>1344_bases TTGAGAGTGGCTACACAGACATTGGTCATCGATGCAGTAGAGCAGTTGGGCTTGCGGGTCACTCTGGGAGATATTGCCTC CAGCACAGGCCTGGCCCTAGAGGAGGCCAAACAGGAGTTGCTGAAGTTAGCCCAAAAGGCTGGGGGGCATCTCCAGGTTT CGCGGCAGGGGGAGATTGCCTACGTTTTCCCGCCCGACTTTCGCGACATTCTCAAGCGCAGGGAGCAGCAGGATCGGCTG GCAGCCTTGCGACGCAAGCTGTGGGGCGGCTTTCTCTACGGGCTGCGCATCTCCTTCGGCATCCTGTTGGTGGTGTCGAT TATCCTCATCACCCTGGCGTTGATAGCTCTGCAGATGGCCAGCAGTCGTGAAGAGGGCAGCGGCAGTCGCAGTCGCTCGC GCGAGGTGGGGTTCTTCTACTTCCCCAACCTTTGGGTGGGCAACCCCTTCTGGAGTCCCTACCCCTACTACGGGGGCTAT TCCGGTCGGGCGCAGCCCCGCCGGGAAAAATCGGAGATGAACTTTTTGGAGGCGGTGTACAGCTTCCTGTTTGGGGACGG GGATCCCAACGCCAACCTGGAAGAGGAGCGCTATGCCTTGATCGGCCAAGTGATCCGCGCCAACGGGGGGGTGATCGCCG CCGAGCAGGTGCTGCCCTACCTGGATGTGGAGCCGGGATCCCCGGCCCTAGAATACGAAGACTATATGCTGCCCATTCTG CTCAAGTTCGACGGCCAGCCGGAGGTAAGCGAGGACGGCGATATCGTCTATCGCTTCCCAGAGCTACAGGTGGCCGCCTC AGAGCGCCGCTCCAAGAAGATCCCGGAGGTGTTGCAAGAAAAACCCTGGGTGTTTAGCCGCGCCACCCCTGAGCAACTGA CCCTAGCTGCTGGCTTGGGTGTGCTCAATTTCCTCTTGGCGGCCATTCTCTACGGGGCGCGGGAGGAGGTGGCAGCCGCC GCTGGCAGCAACGCCTTTTTGGCGTTTATCTACCCGCTGATTGGATTCCTCTTTCTCTACGGCACGCTGTTTTTGGCAGT GCCTGCAGTGCGGTGGCTGACGTTGCAGTTCCGCAACCAGGGGGTGGAGCGCCGCAATCGCATCCGGCGGTTCTGGCAAG AGCGGCTGAAGCGTCCCTCCGAGGCGCTGCTGCGCAAGCTCGACTTTGCCCGCCGCTTCCGCCGCCAAGAAGTGGTGCGG GAGTCGGACACCATCTACTCTACGGAGCGGGATCTGATCGAGCAGCGGGACTACCGGCTGGACGAGCCGGCCTTTCGCCA GCTTTTGCAGCAGGAGCAACCCCTGGAAAGCAAGTCGGAAGAGGTGCCCCGGCCTCGTCTCTAG
Upstream 100 bases:
>100_bases AAGAGAGATACTGGGAATAGGGATGGCTGTAACCCTTGGCTGCAGATGCTGGGCGAGCGTCCCAGTTGGATCCCGGGCAA CAGTAGGTAACCAGCGGAGG
Downstream 100 bases:
>100_bases CGAGGGGTTGAGGCCTGCCCAAGGGTCTTATCGAGCCATGGCCAATGCCAGTAGCGCGCAAGGCAAGCAACAGGATGGGA GGCAGGGGGGCCTGGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIAYVFPPDFRDILKRREQQDRL AALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMASSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGY SGRAQPRREKSEMNFLEAVYSFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLGVLNFLLAAILYGAREEVAAA AGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQGVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVR ESDTIYSTERDLIEQRDYRLDEPAFRQLLQQEQPLESKSEEVPRPRL
Sequences:
>Translated_447_residues MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIAYVFPPDFRDILKRREQQDRL AALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMASSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGY SGRAQPRREKSEMNFLEAVYSFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLGVLNFLLAAILYGAREEVAAA AGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQGVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVR ESDTIYSTERDLIEQRDYRLDEPAFRQLLQQEQPLESKSEEVPRPRL >Mature_447_residues MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIAYVFPPDFRDILKRREQQDRL AALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMASSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGY SGRAQPRREKSEMNFLEAVYSFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLGVLNFLLAAILYGAREEVAAA AGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQGVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVR ESDTIYSTERDLIEQRDYRLDEPAFRQLLQQEQPLESKSEEVPRPRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51005; Mature: 51005
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIA CCCHHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEE YVFPPDFRDILKRREQQDRLAALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGYSGRAQPRREKSEMNFLEAVY HCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH SFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEECCCCCCCCCCCCCEEEEE LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLG EEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH VLNFLLAAILYGAREEVAAAAGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQ HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVRESDTIYSTERDLIEQRDYRL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC DEPAFRQLLQQEQPLESKSEEVPRPRL CCHHHHHHHHHCCCCCHHHHCCCCCCC >Mature Secondary Structure MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIA CCCHHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEE YVFPPDFRDILKRREQQDRLAALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGYSGRAQPRREKSEMNFLEAVY HCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH SFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEECCCCCCCCCCCCCEEEEE LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLG EEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH VLNFLLAAILYGAREEVAAAAGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQ HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVRESDTIYSTERDLIEQRDYRL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC DEPAFRQLLQQEQPLESKSEEVPRPRL CCHHHHHHHHHCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA