Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606445

Identifier: 86606445

GI number: 86606445

Start: 1793011

End: 1794354

Strand: Reverse

Name: 86606445

Synonym: CYA_1792

Alternate gene names: NA

Gene position: 1794354-1793011 (Counterclockwise)

Preceding gene: 86606446

Following gene: 86606444

Centisome position: 61.18

GC content: 61.53

Gene sequence:

>1344_bases
TTGAGAGTGGCTACACAGACATTGGTCATCGATGCAGTAGAGCAGTTGGGCTTGCGGGTCACTCTGGGAGATATTGCCTC
CAGCACAGGCCTGGCCCTAGAGGAGGCCAAACAGGAGTTGCTGAAGTTAGCCCAAAAGGCTGGGGGGCATCTCCAGGTTT
CGCGGCAGGGGGAGATTGCCTACGTTTTCCCGCCCGACTTTCGCGACATTCTCAAGCGCAGGGAGCAGCAGGATCGGCTG
GCAGCCTTGCGACGCAAGCTGTGGGGCGGCTTTCTCTACGGGCTGCGCATCTCCTTCGGCATCCTGTTGGTGGTGTCGAT
TATCCTCATCACCCTGGCGTTGATAGCTCTGCAGATGGCCAGCAGTCGTGAAGAGGGCAGCGGCAGTCGCAGTCGCTCGC
GCGAGGTGGGGTTCTTCTACTTCCCCAACCTTTGGGTGGGCAACCCCTTCTGGAGTCCCTACCCCTACTACGGGGGCTAT
TCCGGTCGGGCGCAGCCCCGCCGGGAAAAATCGGAGATGAACTTTTTGGAGGCGGTGTACAGCTTCCTGTTTGGGGACGG
GGATCCCAACGCCAACCTGGAAGAGGAGCGCTATGCCTTGATCGGCCAAGTGATCCGCGCCAACGGGGGGGTGATCGCCG
CCGAGCAGGTGCTGCCCTACCTGGATGTGGAGCCGGGATCCCCGGCCCTAGAATACGAAGACTATATGCTGCCCATTCTG
CTCAAGTTCGACGGCCAGCCGGAGGTAAGCGAGGACGGCGATATCGTCTATCGCTTCCCAGAGCTACAGGTGGCCGCCTC
AGAGCGCCGCTCCAAGAAGATCCCGGAGGTGTTGCAAGAAAAACCCTGGGTGTTTAGCCGCGCCACCCCTGAGCAACTGA
CCCTAGCTGCTGGCTTGGGTGTGCTCAATTTCCTCTTGGCGGCCATTCTCTACGGGGCGCGGGAGGAGGTGGCAGCCGCC
GCTGGCAGCAACGCCTTTTTGGCGTTTATCTACCCGCTGATTGGATTCCTCTTTCTCTACGGCACGCTGTTTTTGGCAGT
GCCTGCAGTGCGGTGGCTGACGTTGCAGTTCCGCAACCAGGGGGTGGAGCGCCGCAATCGCATCCGGCGGTTCTGGCAAG
AGCGGCTGAAGCGTCCCTCCGAGGCGCTGCTGCGCAAGCTCGACTTTGCCCGCCGCTTCCGCCGCCAAGAAGTGGTGCGG
GAGTCGGACACCATCTACTCTACGGAGCGGGATCTGATCGAGCAGCGGGACTACCGGCTGGACGAGCCGGCCTTTCGCCA
GCTTTTGCAGCAGGAGCAACCCCTGGAAAGCAAGTCGGAAGAGGTGCCCCGGCCTCGTCTCTAG

Upstream 100 bases:

>100_bases
AAGAGAGATACTGGGAATAGGGATGGCTGTAACCCTTGGCTGCAGATGCTGGGCGAGCGTCCCAGTTGGATCCCGGGCAA
CAGTAGGTAACCAGCGGAGG

Downstream 100 bases:

>100_bases
CGAGGGGTTGAGGCCTGCCCAAGGGTCTTATCGAGCCATGGCCAATGCCAGTAGCGCGCAAGGCAAGCAACAGGATGGGA
GGCAGGGGGGCCTGGTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIAYVFPPDFRDILKRREQQDRL
AALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMASSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGY
SGRAQPRREKSEMNFLEAVYSFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL
LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLGVLNFLLAAILYGAREEVAAA
AGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQGVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVR
ESDTIYSTERDLIEQRDYRLDEPAFRQLLQQEQPLESKSEEVPRPRL

Sequences:

>Translated_447_residues
MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIAYVFPPDFRDILKRREQQDRL
AALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMASSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGY
SGRAQPRREKSEMNFLEAVYSFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL
LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLGVLNFLLAAILYGAREEVAAA
AGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQGVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVR
ESDTIYSTERDLIEQRDYRLDEPAFRQLLQQEQPLESKSEEVPRPRL
>Mature_447_residues
MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIAYVFPPDFRDILKRREQQDRL
AALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMASSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGY
SGRAQPRREKSEMNFLEAVYSFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL
LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLGVLNFLLAAILYGAREEVAAA
AGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQGVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVR
ESDTIYSTERDLIEQRDYRLDEPAFRQLLQQEQPLESKSEEVPRPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51005; Mature: 51005

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIA
CCCHHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEE
YVFPPDFRDILKRREQQDRLAALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGYSGRAQPRREKSEMNFLEAVY
HCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEECCCCCCCCCCCCCEEEEE
LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLG
EEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH
VLNFLLAAILYGAREEVAAAAGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQ
HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVRESDTIYSTERDLIEQRDYRL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
DEPAFRQLLQQEQPLESKSEEVPRPRL
CCHHHHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MRVATQTLVIDAVEQLGLRVTLGDIASSTGLALEEAKQELLKLAQKAGGHLQVSRQGEIA
CCCHHHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEE
YVFPPDFRDILKRREQQDRLAALRRKLWGGFLYGLRISFGILLVVSIILITLALIALQMA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSREEGSGSRSRSREVGFFYFPNLWVGNPFWSPYPYYGGYSGRAQPRREKSEMNFLEAVY
HCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SFLFGDGDPNANLEEERYALIGQVIRANGGVIAAEQVLPYLDVEPGSPALEYEDYMLPIL
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHCCCCEECCCCCCCCCCCCCEEEEE
LKFDGQPEVSEDGDIVYRFPELQVAASERRSKKIPEVLQEKPWVFSRATPEQLTLAAGLG
EEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH
VLNFLLAAILYGAREEVAAAAGSNAFLAFIYPLIGFLFLYGTLFLAVPAVRWLTLQFRNQ
HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVERRNRIRRFWQERLKRPSEALLRKLDFARRFRRQEVVRESDTIYSTERDLIEQRDYRL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
DEPAFRQLLQQEQPLESKSEEVPRPRL
CCHHHHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA