| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606392
Identifier: 86606392
GI number: 86606392
Start: 1741648
End: 1742082
Strand: Reverse
Name: 86606392
Synonym: CYA_1737
Alternate gene names: NA
Gene position: 1742082-1741648 (Counterclockwise)
Preceding gene: 86606393
Following gene: 86606386
Centisome position: 59.4
GC content: 48.51
Gene sequence:
>435_bases ATGAGCAATCTATACTCGACAGACTTTAACTTGTGGATTGACCGAACAACCCGGCTATTGCGGGAAAGGCGCTGGCATGA AATTGACCTAACACACTTAATTGAAGAGGTTGAGAATTTGGGCAAGAGCGAACGACGAGGGATTACCAGTCAATTAACTC GCCTTCTGCTGCATCTACTCAAGTGGCAATATCAACCTCAGCGCCGTTCAGATAGCTGGCTAGATTCCATTACAGATGCG CGAACCCAAATCGGATTGGCCATAGAAGATAGCCCCAGCCTAAAAGGTTATCTGATAGAGCAACTTGAAGAGAGTTATCA ACGGGCGCGCCGCCAAGCAGCCAGGCAAACGGGGATAGAAATCTCGACATTTCCAGATGTCTGTCCCTACTCTCCAGAGT TGGTGCTTGCAGAAGATTGGCTGCCGGAAGTTTGA
Upstream 100 bases:
>100_bases TGAGAACTCAGGTGTTACAGGTTTTATTGTAGTAAACTCAAGAAGGACGTAGTCTGGATTTCATAATTATCGCGACCCTA TTTTTCAGCAGGACAAAGCT
Downstream 100 bases:
>100_bases CAGTCCACACCACAAAGCATTTAACGGTGGACAGCATTCCCACAGTACTGACCCCACAGTTCTGGCCTGGTCTTGTCTCA CACAGGCAATCGATTATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSNLYSTDFNLWIDRTTRLLRERRWHEIDLTHLIEEVENLGKSERRGITSQLTRLLLHLLKWQYQPQRRSDSWLDSITDA RTQIGLAIEDSPSLKGYLIEQLEESYQRARRQAARQTGIEISTFPDVCPYSPELVLAEDWLPEV
Sequences:
>Translated_144_residues MSNLYSTDFNLWIDRTTRLLRERRWHEIDLTHLIEEVENLGKSERRGITSQLTRLLLHLLKWQYQPQRRSDSWLDSITDA RTQIGLAIEDSPSLKGYLIEQLEESYQRARRQAARQTGIEISTFPDVCPYSPELVLAEDWLPEV >Mature_143_residues SNLYSTDFNLWIDRTTRLLRERRWHEIDLTHLIEEVENLGKSERRGITSQLTRLLLHLLKWQYQPQRRSDSWLDSITDAR TQIGLAIEDSPSLKGYLIEQLEESYQRARRQAARQTGIEISTFPDVCPYSPELVLAEDWLPEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17026; Mature: 16895
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLYSTDFNLWIDRTTRLLRERRWHEIDLTHLIEEVENLGKSERRGITSQLTRLLLHLL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH KWQYQPQRRSDSWLDSITDARTQIGLAIEDSPSLKGYLIEQLEESYQRARRQAARQTGIE HHCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ISTFPDVCPYSPELVLAEDWLPEV CCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure SNLYSTDFNLWIDRTTRLLRERRWHEIDLTHLIEEVENLGKSERRGITSQLTRLLLHLL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH KWQYQPQRRSDSWLDSITDARTQIGLAIEDSPSLKGYLIEQLEESYQRARRQAARQTGIE HHCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC ISTFPDVCPYSPELVLAEDWLPEV CCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA