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The map label for this gene is ycgR [H]

Identifier: 86606393

GI number: 86606393

Start: 1742438

End: 1743493

Strand: Reverse

Name: ycgR [H]

Synonym: CYA_1738

Alternate gene names: 86606393

Gene position: 1743493-1742438 (Counterclockwise)

Preceding gene: 86606394

Following gene: 86606392

Centisome position: 59.45

GC content: 57.1

Gene sequence:

>1056_bases
TTGGATTCTCCTCTCTGGCGCGATGGGTTCACCCTCTTTTTGAGCATCGTGGTGCAGGCCATGCCCTTTTTGCTCTTGGG
GGTGTTCCTTTCGGGGCTGATGGCGGTGTTTGTGGAGGGATCCCAGTTGGCCCGTTTCCTGCCCAAAGGCAAAATCGGCA
GCGCGGTGGCCGGTGGCGCTTTAGGATTCTTTTTCCCGGTGTGCGAGTGTGGCAACCTGCCGGTGGCCCGTCAACTGGTG
ATCAAAGGGATCCCACCCCACGTGGCGGTGGCCTTTCTGTTGGCGGCGCCGGTGTTTAACCCGGTGGTGATCTTTTCCAC
TTGGATTGCCTTTCGCTCCATGCCGGAGCTGGTGATCTACCGAGTTCTCTTTTCCTTCGGCATTGCGGTTGTCGTCGGCT
TGATCTTCAGCCTGCAAAAGGATTTCCAGCCTCTGTTGCAGCCGTCAGTCTGGCGGGAGCTGCAGCGCAATTGCTCCCAA
GAAGCTGATCCGAAGAACATCTCCCGCTCGCCGTTGTTGCAGGGGGGCACCTTCTGGATTGGATCCCAGAGCCCTGCTCA
AGGGGCCTCTGGCGGATCCCTGGCCACTTTACAAACGGCTGAAGATGTGTATCGCTCTGCTCTGGCCGCTGCGCCTTCTC
CCTCCAGGGGACAAAAAGGAGTTCTCCTGCTGCAGACCTGGGCCAGGGAGATCCGCGAATTGGGATCCGTGCTCATCTTG
GGCTCGGCGATGGCGGCCCTGATTCAAACGGTGATCCCGCGTTCGTTTGTGCTGGATTATGGCCAAGATGCATTGCTCTC
AATCCTGATCATGATGGCCCTGGCCGGGATCATCTCCATCTGCTCGACGGTGGATGCCTTTTTCGCCCTCTCCTTTGCCG
CCACCTTCACGCCGGGATCCCTGTTGGCTTTTATGGTGTTTGGGCCGATAGTAGACTTGAAAGCCATAGGCTTGATGCTC
ACTCTGTTCAAGCCCCGCGCCATTTTCTACTTCGTGATCTTGGTCTTTCAGCTTACTCTGGTGGGAGCTTTAGCCATCAA
CTACTATGGCAGTTAA

Upstream 100 bases:

>100_bases
CCCTATAGAAGAGCGGGGTTGAGAGCCGTTTGACAGGGCGCTGGGCCGGGATCCCAACTCAATAGAGCCCAAATTGGTGT
GAGGTGGTGCGTTGAGCCTT

Downstream 100 bases:

>100_bases
AGCGTTTGTTTGAACCTTTCTCCACAGGGACACCCTCTCCATCCACTCTCCGTCAAATATTCGTCAAATATAGTTGCTTC
AGTTTAGGGTAAGACGCCTG

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MDSPLWRDGFTLFLSIVVQAMPFLLLGVFLSGLMAVFVEGSQLARFLPKGKIGSAVAGGALGFFFPVCECGNLPVARQLV
IKGIPPHVAVAFLLAAPVFNPVVIFSTWIAFRSMPELVIYRVLFSFGIAVVVGLIFSLQKDFQPLLQPSVWRELQRNCSQ
EADPKNISRSPLLQGGTFWIGSQSPAQGASGGSLATLQTAEDVYRSALAAAPSPSRGQKGVLLLQTWAREIRELGSVLIL
GSAMAALIQTVIPRSFVLDYGQDALLSILIMMALAGIISICSTVDAFFALSFAATFTPGSLLAFMVFGPIVDLKAIGLML
TLFKPRAIFYFVILVFQLTLVGALAINYYGS

Sequences:

>Translated_351_residues
MDSPLWRDGFTLFLSIVVQAMPFLLLGVFLSGLMAVFVEGSQLARFLPKGKIGSAVAGGALGFFFPVCECGNLPVARQLV
IKGIPPHVAVAFLLAAPVFNPVVIFSTWIAFRSMPELVIYRVLFSFGIAVVVGLIFSLQKDFQPLLQPSVWRELQRNCSQ
EADPKNISRSPLLQGGTFWIGSQSPAQGASGGSLATLQTAEDVYRSALAAAPSPSRGQKGVLLLQTWAREIRELGSVLIL
GSAMAALIQTVIPRSFVLDYGQDALLSILIMMALAGIISICSTVDAFFALSFAATFTPGSLLAFMVFGPIVDLKAIGLML
TLFKPRAIFYFVILVFQLTLVGALAINYYGS
>Mature_351_residues
MDSPLWRDGFTLFLSIVVQAMPFLLLGVFLSGLMAVFVEGSQLARFLPKGKIGSAVAGGALGFFFPVCECGNLPVARQLV
IKGIPPHVAVAFLLAAPVFNPVVIFSTWIAFRSMPELVIYRVLFSFGIAVVVGLIFSLQKDFQPLLQPSVWRELQRNCSQ
EADPKNISRSPLLQGGTFWIGSQSPAQGASGGSLATLQTAEDVYRSALAAAPSPSRGQKGVLLLQTWAREIRELGSVLIL
GSAMAALIQTVIPRSFVLDYGQDALLSILIMMALAGIISICSTVDAFFALSFAATFTPGSLLAFMVFGPIVDLKAIGLML
TLFKPRAIFYFVILVFQLTLVGALAINYYGS

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 37707; Mature: 37707

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSPLWRDGFTLFLSIVVQAMPFLLLGVFLSGLMAVFVEGSQLARFLPKGKIGSAVAGGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHH
LGFFFPVCECGNLPVARQLVIKGIPPHVAVAFLLAAPVFNPVVIFSTWIAFRSMPELVIY
HHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RVLFSFGIAVVVGLIFSLQKDFQPLLQPSVWRELQRNCSQEADPKNISRSPLLQGGTFWI
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
GSQSPAQGASGGSLATLQTAEDVYRSALAAAPSPSRGQKGVLLLQTWAREIRELGSVLIL
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH
GSAMAALIQTVIPRSFVLDYGQDALLSILIMMALAGIISICSTVDAFFALSFAATFTPGS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLAFMVFGPIVDLKAIGLMLTLFKPRAIFYFVILVFQLTLVGALAINYYGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSPLWRDGFTLFLSIVVQAMPFLLLGVFLSGLMAVFVEGSQLARFLPKGKIGSAVAGGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHH
LGFFFPVCECGNLPVARQLVIKGIPPHVAVAFLLAAPVFNPVVIFSTWIAFRSMPELVIY
HHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RVLFSFGIAVVVGLIFSLQKDFQPLLQPSVWRELQRNCSQEADPKNISRSPLLQGGTFWI
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
GSQSPAQGASGGSLATLQTAEDVYRSALAAAPSPSRGQKGVLLLQTWAREIRELGSVLIL
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH
GSAMAALIQTVIPRSFVLDYGQDALLSILIMMALAGIISICSTVDAFFALSFAATFTPGS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLAFMVFGPIVDLKAIGLMLTLFKPRAIFYFVILVFQLTLVGALAINYYGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]