| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606386
Identifier: 86606386
GI number: 86606386
Start: 1735747
End: 1735908
Strand: Reverse
Name: 86606386
Synonym: CYA_1731
Alternate gene names: NA
Gene position: 1735908-1735747 (Counterclockwise)
Preceding gene: 86606392
Following gene: 86606383
Centisome position: 59.19
GC content: 46.91
Gene sequence:
>162_bases TTGAGTGTGCTGGCTCGTTTCCAAACCTCGATTTTCCATCTGGTGGTCTTGGCCAGTTTGGATTTCAGCAAAATCAGGAT CCTGGAGCCCAGGATCCGCGAAAAGGCTTATGCTGCTGAACTTCTATCTCATTTGACAACCAATCAAACGGACACAACTT GA
Upstream 100 bases:
>100_bases ATCTGTGGCGAATCAACACCTTCAACCCTATAACCTCAAAGTTAACAGAAGGATATCTAAAGGTTAACTTTGGGTTAAGT CAAGAGAAAAATCGATATTT
Downstream 100 bases:
>100_bases ATAAGAGCTAAGCTTAGACGGCTGCAAAAAAACTCGATCCAGATCCAAGATGTGTAAAATTTGATACAAAGATGTTACCC CCCTCTCGGCAAGCTTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MSVLARFQTSIFHLVVLASLDFSKIRILEPRIREKAYAAELLSHLTTNQTDTT
Sequences:
>Translated_53_residues MSVLARFQTSIFHLVVLASLDFSKIRILEPRIREKAYAAELLSHLTTNQTDTT >Mature_52_residues SVLARFQTSIFHLVVLASLDFSKIRILEPRIREKAYAAELLSHLTTNQTDTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6047; Mature: 5916
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLARFQTSIFHLVVLASLDFSKIRILEPRIREKAYAAELLSHLTTNQTDTT CCHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVLARFQTSIFHLVVLASLDFSKIRILEPRIREKAYAAELLSHLTTNQTDTT CHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA