| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86606374
Identifier: 86606374
GI number: 86606374
Start: 1725323
End: 1725685
Strand: Reverse
Name: 86606374
Synonym: CYA_1718
Alternate gene names: NA
Gene position: 1725685-1725323 (Counterclockwise)
Preceding gene: 86606379
Following gene: 86606371
Centisome position: 58.84
GC content: 60.61
Gene sequence:
>363_bases TTGACTCTGACGCCGGAAGTGCTGACCAGCGTAGCGGATTACTTCAAGGTTTTGGCGGAGCCCAGCCGGCTGCAGATCCT GTGTCAGTTGCGCTCGGGACCCAAGAACGTCACCCAGATCTTAGAGGCCACCGGCATGGGCCAGGCCAATGTTTCCAAAC ATCTCAAGATCTTGGCGCAGGCAGGGATCGTCAGCCGCGAGCCCAGGGGCGTGAGCGTCTACTACCAAATTGCCGATCCC ATCTGCTTTGAGCTGTGCGAGGTGGTGTGCAAGCAGTTGATCGAGCGGCTCAAGCAGCAAGCCCGGCAATTGCAGCCGCT GGCAGCCCTTCACTCCGGCAGGCTGAGCCGGGAAGGCTCCTGA
Upstream 100 bases:
>100_bases TACTGTATAACTATTTAGTGTTAAAATCAAGCCAGCGCATCCCTCAAGACAGGCTATGGATTGGGACGAGCTCGTGAAAG GTGGCAAAGACGAGTGCCAG
Downstream 100 bases:
>100_bases GGGCGGGGGCGGCGCAGCATCAGGGGAAGGCTCAGCAGCCCAAACAGGGCCACCACCGCAGCCATGATCCAGACGAGAAA ACGGCTGGGGCGAAAGTTGC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; Regulatory Protein ArsR; ArsR Family Transcriptional Repressor; Regulatory Proteins ArsR Family Protein; Transcriptional Regulator TrmB; Transcription Regulator ArsR; Bacterial Regulatory Protein ArsR Family
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTLTPEVLTSVADYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHLKILAQAGIVSREPRGVSVYYQIADP ICFELCEVVCKQLIERLKQQARQLQPLAALHSGRLSREGS
Sequences:
>Translated_120_residues MTLTPEVLTSVADYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHLKILAQAGIVSREPRGVSVYYQIADP ICFELCEVVCKQLIERLKQQARQLQPLAALHSGRLSREGS >Mature_119_residues TLTPEVLTSVADYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHLKILAQAGIVSREPRGVSVYYQIADPI CFELCEVVCKQLIERLKQQARQLQPLAALHSGRLSREGS
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13247; Mature: 13115
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTPEVLTSVADYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHLKILAQ CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH AGIVSREPRGVSVYYQIADPICFELCEVVCKQLIERLKQQARQLQPLAALHSGRLSREGS HCCCCCCCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLTPEVLTSVADYFKVLAEPSRLQILCQLRSGPKNVTQILEATGMGQANVSKHLKILAQ CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH AGIVSREPRGVSVYYQIADPICFELCEVVCKQLIERLKQQARQLQPLAALHSGRLSREGS HCCCCCCCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA