Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606379

Identifier: 86606379

GI number: 86606379

Start: 1729478

End: 1730680

Strand: Reverse

Name: 86606379

Synonym: CYA_1723

Alternate gene names: NA

Gene position: 1730680-1729478 (Counterclockwise)

Preceding gene: 86606382

Following gene: 86606374

Centisome position: 59.01

GC content: 65.09

Gene sequence:

>1203_bases
ATGGTCTTGAGCCTCTGGGGGATCGGGCGCTGGCTTTGGGATCCCTCGGCCTGGATCCAGGTGGTGGCCGGGCTGCTCCT
AAGTGTGGCGACGTTGCTGTACTGGCTGAAGACCCGCCCCGCCGACTGTCTGCTGGTGGAGCCCCAGAGCTGGCGCCTCA
GCCGCCTCAGCCCTCATCGCTGGCTTATCCAGGCCGAGTTTGTGGCCCGCAACCTCAACCCCCTTTTTGAGGTCACCTTG
GCCCAGGTGCAGCCGCGGCTGCATCTGCTCAGCGCCGGCTCCCTCGAAGGGATCCAAAGTAGGATCCGCCTGCGCTCCCG
CCATCCGGATCTGCCCCCCCGCCCAGACAACTACTGGCAGGCCTACATCATCTCCCCCCAAAGCCAGACCGGCTTAGAAG
TCGAGATCGAGCTAGAGGGGGAAGGGCTGGCAGATTTGCGCTCGGCCTGGCTGGAGTTGGACTACATCCAGTACGGGCGG
CAACGGCGCACCCTGAAGACCAGCCACCTGATCCTGCCCTTGCAGGAAGTGGAGCCCTTGCCGGAGCTGGCCTGGCAGCA
GCAGGGGCTGGTGAGTTGGGCTCCTGTTCCCACCCATCTGCTTACCCCCAGCGACGACCTAGCCGAGGTGCTGCGGCACT
ACGTAGGCCCCCATATCCAGCCCGGCGATATTGTGGCCATCTCGGAAAGCGCGGCGGCCATCGTCCAGGGCAACTTTCGC
CATCCCCTGCAGGTGCAGCCCGGCTGGCTGGCCCGCACCCTCTGCTACTTCTTCCCTTCCAAAACCAGTCTCTCAAGCTG
CTATGGGATGCAGACGTTGATCGACTGTTCGGGGGCCTGGCGGGTGTTGGGGGCTTTTGTCGTCGGATCCCTGGCCAAAT
TGCTGGGGATCCGCGGAGCCTTCTACGCCCTGGCGGGGGAGCAGGCGGCCTTGATCGACGATGTCACCGGCACTTTGCCC
CCCTACGACCAGTTCATCGTCTTGGGGCCGCGGGATCCAGCCAAGCTGGTGGCCGAGCTCCACGCCCAGACCGGCTACGA
GGTGGCCATTGTGGATGCCAACGACCTGGGCGAAGTCAACGTCTTGGCGGCCAGCCCAGGTGTGGAGCGGGAGCTGGTGG
AGCAGGCTCTGCGCAAGAACCCGGCGGGCAATGCGGCAGAGCAAACGCCGATTGTGCTCATCCGGAAGCGGCTGCCGGCA
TAG

Upstream 100 bases:

>100_bases
TGAAGGAAGGGGCAGACTTGAGCAGGGTTTAAGGAGTGGGATCCCAATGGCAACCATTCGGATGGTGAGCCGAGGTGTGG
TGGCTGGCGTATTGGCTGGC

Downstream 100 bases:

>100_bases
AGTTCGTCTGAGACTTGAGAACCTGCATCGCCTGGTGGGTCGACAAGAAGAAGCGCTCGGCGCCCACTTTCTCCACAAAC
CCAGCCCTTTTGAGGCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MVLSLWGIGRWLWDPSAWIQVVAGLLLSVATLLYWLKTRPADCLLVEPQSWRLSRLSPHRWLIQAEFVARNLNPLFEVTL
AQVQPRLHLLSAGSLEGIQSRIRLRSRHPDLPPRPDNYWQAYIISPQSQTGLEVEIELEGEGLADLRSAWLELDYIQYGR
QRRTLKTSHLILPLQEVEPLPELAWQQQGLVSWAPVPTHLLTPSDDLAEVLRHYVGPHIQPGDIVAISESAAAIVQGNFR
HPLQVQPGWLARTLCYFFPSKTSLSSCYGMQTLIDCSGAWRVLGAFVVGSLAKLLGIRGAFYALAGEQAALIDDVTGTLP
PYDQFIVLGPRDPAKLVAELHAQTGYEVAIVDANDLGEVNVLAASPGVERELVEQALRKNPAGNAAEQTPIVLIRKRLPA

Sequences:

>Translated_400_residues
MVLSLWGIGRWLWDPSAWIQVVAGLLLSVATLLYWLKTRPADCLLVEPQSWRLSRLSPHRWLIQAEFVARNLNPLFEVTL
AQVQPRLHLLSAGSLEGIQSRIRLRSRHPDLPPRPDNYWQAYIISPQSQTGLEVEIELEGEGLADLRSAWLELDYIQYGR
QRRTLKTSHLILPLQEVEPLPELAWQQQGLVSWAPVPTHLLTPSDDLAEVLRHYVGPHIQPGDIVAISESAAAIVQGNFR
HPLQVQPGWLARTLCYFFPSKTSLSSCYGMQTLIDCSGAWRVLGAFVVGSLAKLLGIRGAFYALAGEQAALIDDVTGTLP
PYDQFIVLGPRDPAKLVAELHAQTGYEVAIVDANDLGEVNVLAASPGVERELVEQALRKNPAGNAAEQTPIVLIRKRLPA
>Mature_400_residues
MVLSLWGIGRWLWDPSAWIQVVAGLLLSVATLLYWLKTRPADCLLVEPQSWRLSRLSPHRWLIQAEFVARNLNPLFEVTL
AQVQPRLHLLSAGSLEGIQSRIRLRSRHPDLPPRPDNYWQAYIISPQSQTGLEVEIELEGEGLADLRSAWLELDYIQYGR
QRRTLKTSHLILPLQEVEPLPELAWQQQGLVSWAPVPTHLLTPSDDLAEVLRHYVGPHIQPGDIVAISESAAAIVQGNFR
HPLQVQPGWLARTLCYFFPSKTSLSSCYGMQTLIDCSGAWRVLGAFVVGSLAKLLGIRGAFYALAGEQAALIDDVTGTLP
PYDQFIVLGPRDPAKLVAELHAQTGYEVAIVDANDLGEVNVLAASPGVERELVEQALRKNPAGNAAEQTPIVLIRKRLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44379; Mature: 44379

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSLWGIGRWLWDPSAWIQVVAGLLLSVATLLYWLKTRPADCLLVEPQSWRLSRLSPHR
CEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
WLIQAEFVARNLNPLFEVTLAQVQPRLHLLSAGSLEGIQSRIRLRSRHPDLPPRPDNYWQ
EEEEHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEE
AYIISPQSQTGLEVEIELEGEGLADLRSAWLELDYIQYGRQRRTLKTSHLILPLQEVEPL
EEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHCCEECCEEEEEHHHCCCC
PELAWQQQGLVSWAPVPTHLLTPSDDLAEVLRHYVGPHIQPGDIVAISESAAAIVQGNFR
HHHHHHHCCCEEECCCCCEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCC
HPLQVQPGWLARTLCYFFPSKTSLSSCYGMQTLIDCSGAWRVLGAFVVGSLAKLLGIRGA
CCCEECCCHHHHHHHHHCCCCCCHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHH
FYALAGEQAALIDDVTGTLPPYDQFIVLGPRDPAKLVAELHAQTGYEVAIVDANDLGEVN
HHHHCCCCEEEHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCEE
VLAASPGVERELVEQALRKNPAGNAAEQTPIVLIRKRLPA
EEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MVLSLWGIGRWLWDPSAWIQVVAGLLLSVATLLYWLKTRPADCLLVEPQSWRLSRLSPHR
CEEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
WLIQAEFVARNLNPLFEVTLAQVQPRLHLLSAGSLEGIQSRIRLRSRHPDLPPRPDNYWQ
EEEEHHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCEE
AYIISPQSQTGLEVEIELEGEGLADLRSAWLELDYIQYGRQRRTLKTSHLILPLQEVEPL
EEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHCCEECCEEEEEHHHCCCC
PELAWQQQGLVSWAPVPTHLLTPSDDLAEVLRHYVGPHIQPGDIVAISESAAAIVQGNFR
HHHHHHHCCCEEECCCCCEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCC
HPLQVQPGWLARTLCYFFPSKTSLSSCYGMQTLIDCSGAWRVLGAFVVGSLAKLLGIRGA
CCCEECCCHHHHHHHHHCCCCCCHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHH
FYALAGEQAALIDDVTGTLPPYDQFIVLGPRDPAKLVAELHAQTGYEVAIVDANDLGEVN
HHHHCCCCEEEHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCEE
VLAASPGVERELVEQALRKNPAGNAAEQTPIVLIRKRLPA
EEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA