| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606371
Identifier: 86606371
GI number: 86606371
Start: 1723211
End: 1723624
Strand: Reverse
Name: 86606371
Synonym: CYA_1716
Alternate gene names: NA
Gene position: 1723624-1723211 (Counterclockwise)
Preceding gene: 86606374
Following gene: 86606370
Centisome position: 58.77
GC content: 61.35
Gene sequence:
>414_bases GTGATCAAACCCCACTCTGCCCATCTGTTGACCCCCGACTTCCGCCTCAGCTTGGCAGTGCTGGCTTTGGCGGTGCCGCT GTTGTGGCTCTCGTTTTGGCTAGGGTTGGGAGTGGGGTTGTTTGGCCTGTTTTTGCTGGTACAGACCTGTCTGATCGGGC TGGCCTTTACCCGCACGGCGCTGCAGGTCTACAGCGGCTCCCGGCGCATCCGCGAGTTCCCCTACAGCGAGTGGCAGGAC TGGCAGATCTTCTGGCGGCCGGTGCCGATTTTGTTTTTCTTCCGAGAAAGCCGGAGCATTCACTTTTTGCCGATGCTCTT CAACCCGGTCGAGCTGCGCATCTGCCTGGAGGAGCGGCTAGGCCACCTGCACGCCCGACGGCAGGGATCCCCTTTCCACC CATCAGGCCGATGA
Upstream 100 bases:
>100_bases TGTTTGGTATGCCCCCAACTTACCCAGAGTCGGGATCCCTCCGGAGAAAGGTAGTGGCAGCGGCGTAAAATGGAGCTGGC AAGCGGAGGAGAAGCAAAAA
Downstream 100 bases:
>100_bases GCGGTTCCGGGGGCTGGGTTTGGCAAGAGGCAGGGAGATGGCGTTGGCTGCAGTGTCAACTGCTGGCGGGGTGGCCCCAT GCTTTTGGCTGTCGTCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTALQVYSGSRRIREFPYSEWQD WQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERLGHLHARRQGSPFHPSGR
Sequences:
>Translated_137_residues MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTALQVYSGSRRIREFPYSEWQD WQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERLGHLHARRQGSPFHPSGR >Mature_137_residues MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTALQVYSGSRRIREFPYSEWQD WQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERLGHLHARRQGSPFHPSGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15971; Mature: 15971
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTA CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQVYSGSRRIREFPYSEWQDWQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERL HHHHHCCHHHHHCCCCCCCCCEEEEECHHEEEEEECCCCEEEEHHHCCHHHHHHHHHHHH GHLHARRQGSPFHPSGR HHHHHHCCCCCCCCCCC >Mature Secondary Structure MIKPHSAHLLTPDFRLSLAVLALAVPLLWLSFWLGLGVGLFGLFLLVQTCLIGLAFTRTA CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQVYSGSRRIREFPYSEWQDWQIFWRPVPILFFFRESRSIHFLPMLFNPVELRICLEERL HHHHHCCHHHHHCCCCCCCCCEEEEECHHEEEEEECCCCEEEEHHHCCHHHHHHHHHHHH GHLHARRQGSPFHPSGR HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA