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The map label for this gene is psbN

Identifier: 86606002

GI number: 86606002

Start: 1341084

End: 1341215

Strand: Reverse

Name: psbN

Synonym: CYA_1325

Alternate gene names: 86606002

Gene position: 1341215-1341084 (Counterclockwise)

Preceding gene: 86606004

Following gene: 86606001

Centisome position: 45.73

GC content: 53.79

Gene sequence:

>132_bases
ATGGAATCCACCCTTTCGCTGGTTGTGGCCATTGCGGCAATAACCATCTGCATCACCGCCTTTGCCATCTACACCGCCTT
TGGCCCCCCTTCCAAAAACTTGCAGGATCCCTACGAGATGCACGAGGATTGA

Upstream 100 bases:

>100_bases
ATCACGCTAACAGAATCTGGTCACTCCCCTTTGCCGCCGGCAATGAATTGTAAACTTGTGTAATATGTAGGGAGATTCTC
TCAGAACTGAAGAGCTAACC

Downstream 100 bases:

>100_bases
AGCCGGTTGTTGTGCGGTTCCGCTGCATGCCTGTTCGGTTGCCCTCCCGTCTCTCCTTCCACAAATACCAGGGGCTGGGG
AACGACTTTATCTTGGTGGA

Product: photosystem II reaction center protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 43; Mature: 43

Protein sequence:

>43_residues
MESTLSLVVAIAAITICITAFAIYTAFGPPSKNLQDPYEMHED

Sequences:

>Translated_43_residues
MESTLSLVVAIAAITICITAFAIYTAFGPPSKNLQDPYEMHED
>Mature_43_residues
MESTLSLVVAIAAITICITAFAIYTAFGPPSKNLQDPYEMHED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBN_SYNJA (Q2JUV5)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_474765.1
- STRING:   Q2JUV5
- GeneID:   3899493
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_1325
- TIGR:   CYA_1325
- HOGENOM:   HBG710424
- ProtClustDB:   PRK13183
- BioCyc:   SSP321327:CYA_1325-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00293
- InterPro:   IPR003398

Pfam domain/function: PF02468 PsbN

EC number: NA

Molecular weight: Translated: 4673; Mature: 4673

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14cb2400)-;

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTLSLVVAIAAITICITAFAIYTAFGPPSKNLQDPYEMHED
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MESTLSLVVAIAAITICITAFAIYTAFGPPSKNLQDPYEMHED
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA