Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605922

Identifier: 86605922

GI number: 86605922

Start: 1250867

End: 1251250

Strand: Reverse

Name: 86605922

Synonym: CYA_1239

Alternate gene names: NA

Gene position: 1251250-1250867 (Counterclockwise)

Preceding gene: 86605923

Following gene: 86605921

Centisome position: 42.66

GC content: 57.81

Gene sequence:

>384_bases
ATGCGACTGTTCAACTACCTGATCCTGTTCTCGGCCCTCCTGGGAATCGCTCTTTTCGCCATGCAAAACGCCAGCCCGGT
CACGATTACCTTTGCCCCCGGCGTCAGCGTTGAAAGCCCGCTGGCGATCGAACTGTTGGCCTCTGCCGGGATCGGGGCCG
CCCTTGCCTGGCTCTATAGCCTCTGGATGCGTCTCCAATTCAGCATCGAAGCCCGCGAGAAAAATCGGCAGTTGCAAGAA
AAGGAAGTCACCATTAGCGAGCTGAAGGAAATGGTGGTGGAGCTGGAAGCCAAAGTCAAGCAACTGCCCCCCAGCAAGCG
TGCCGAGCCCCAGGAAGACATTCAGGACGTTAAGGAAGTCACCACAGAGGGATCCCCTGCCTAG

Upstream 100 bases:

>100_bases
TGGCTGGTTCTTCTGAGATCTCTTGGGCCAACAAATCAACCCCCGTTTGTGGGTATTCTGGTGCTGGCAAGCCGTCGTGG
ATCCCTCTGAGGAGAAAAGC

Downstream 100 bases:

>100_bases
AACTGTTCCGAATGGATCCCGTCGATCTCCAAGCAGTTGGGGTAAAATTGAAATTCTGCTTGCCTCTTCCACTAGCCCAT
CACTTCCTATGCAGGTCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRLFNYLILFSALLGIALFAMQNASPVTITFAPGVSVESPLAIELLASAGIGAALAWLYSLWMRLQFSIEAREKNRQLQE
KEVTISELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEVTTEGSPA

Sequences:

>Translated_127_residues
MRLFNYLILFSALLGIALFAMQNASPVTITFAPGVSVESPLAIELLASAGIGAALAWLYSLWMRLQFSIEAREKNRQLQE
KEVTISELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEVTTEGSPA
>Mature_127_residues
MRLFNYLILFSALLGIALFAMQNASPVTITFAPGVSVESPLAIELLASAGIGAALAWLYSLWMRLQFSIEAREKNRQLQE
KEVTISELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEVTTEGSPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14062; Mature: 14062

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFNYLILFSALLGIALFAMQNASPVTITFAPGVSVESPLAIELLASAGIGAALAWLYS
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHH
LWMRLQFSIEAREKNRQLQEKEVTISELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TTEGSPA
HCCCCCC
>Mature Secondary Structure
MRLFNYLILFSALLGIALFAMQNASPVTITFAPGVSVESPLAIELLASAGIGAALAWLYS
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHH
LWMRLQFSIEAREKNRQLQEKEVTISELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TTEGSPA
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA