| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yeaC [H]
Identifier: 86605907
GI number: 86605907
Start: 1235827
End: 1236822
Strand: Reverse
Name: yeaC [H]
Synonym: CYA_1224
Alternate gene names: 86605907
Gene position: 1236822-1235827 (Counterclockwise)
Preceding gene: 86605909
Following gene: 86605906
Centisome position: 42.17
GC content: 62.35
Gene sequence:
>996_bases ATGGCAAGTGTTGGCACCCTGTCCGGTTCAGCGCGGATCCCGGCGGAGCGATTGCAAACTTTGCGGCAGCAGATCGGCAA GCTGATCGCCAACGTCGAGTCGGTGTTTCAAGGCAAGCCACGGGTGGTGCAGGCCGTGGTGACGGCCCTGGTGGCGGAAG GCCATGTCCTCCTGGAGGACGTGCCGGGAGTAGGCAAAACCACGTTGGCGCGGGCCATTGCCCGCAGCTTGGGGGCCAAG TTTCAGCGAATTCAATTTACCAGCGACCTCTTGCCGACTGACATTCTTGGCCTCACCCTTTTCAACAAAGAGAAAGGGGA GTTTGAATTTCGCCCAGGCCCCATTTTTGCCCATGTCATCCTGGCCGACGAGATCAATCGCACCTCTCCCCGCACCCAGA GTGCCCTGCTAGAGGCAATGGCGGAAAAGCAGGTTTCGCTGGACAACCGCACCTACCCGCTGCCCAGTCCCTTTATGGTG TTGGCCACCCAAAACCCCTTGGAGTATCACGGCACCTATCCCCTCCCGGAAAGCCAGTTGGATCGGTTTCTGGTGCGGCT GTCCATCGGCTACCCCAGCCCTGAGGTGGAGCGGGCTTTGCTGCTGCAGCGACAGCAGGCAGAGCCGGTGGAGGCTCTCC AGCCGGTGCTTTCCCTGGCGGAGCTGCGGGAGATCCAGGCGGCGGTGGATCAGGTGTACCTGGATGGATCCCTGGCCGAC TATCTGCTGCAGGTGGTGCAGGCGACGCGTGCCTCCAGACTGTTGCGGGCCGGCGTGTCCACCCGCGGGGCGTTGGCCTT GGCAAGGGCAGCACGGGCGCAGGCGTTGGTGAGAGGGCGGAGCTTTTGCCTACCGGAAGATCTGCAAGCTTTGTTTGTGC CGGTGCTGGCCCATCGCATTTCTTTGGCCGGATCTGGGGACATGACGAGCAACCGACGGCAGGAGGCAGAGGCCGTCATC CGCGACATCGTGGCAACGGTTGAGCCGCCAGTTTGA
Upstream 100 bases:
>100_bases CTATGATACTCCGGTTTTCCACCGGGGTTTTGTGGGATCCCCTTTGGGTTGCCGGTGGGTTGGGCCTGTATGGTGGAATA GGCCCCTTTGGGAGTGGTTT
Downstream 100 bases:
>100_bases GGAGGGATCCCTTAGGCGATAATAGGAGCCAGCGGTCTTGGGCAGAACTGCGGATGTCGGATCCCAATCAAGAAATTAAA GACCTCATCCTGGCTTTGGA
Product: AAA family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MASVGTLSGSARIPAERLQTLRQQIGKLIANVESVFQGKPRVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIARSLGAK FQRIQFTSDLLPTDILGLTLFNKEKGEFEFRPGPIFAHVILADEINRTSPRTQSALLEAMAEKQVSLDNRTYPLPSPFMV LATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVEALQPVLSLAELREIQAAVDQVYLDGSLAD YLLQVVQATRASRLLRAGVSTRGALALARAARAQALVRGRSFCLPEDLQALFVPVLAHRISLAGSGDMTSNRRQEAEAVI RDIVATVEPPV
Sequences:
>Translated_331_residues MASVGTLSGSARIPAERLQTLRQQIGKLIANVESVFQGKPRVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIARSLGAK FQRIQFTSDLLPTDILGLTLFNKEKGEFEFRPGPIFAHVILADEINRTSPRTQSALLEAMAEKQVSLDNRTYPLPSPFMV LATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVEALQPVLSLAELREIQAAVDQVYLDGSLAD YLLQVVQATRASRLLRAGVSTRGALALARAARAQALVRGRSFCLPEDLQALFVPVLAHRISLAGSGDMTSNRRQEAEAVI RDIVATVEPPV >Mature_330_residues ASVGTLSGSARIPAERLQTLRQQIGKLIANVESVFQGKPRVVQAVVTALVAEGHVLLEDVPGVGKTTLARAIARSLGAKF QRIQFTSDLLPTDILGLTLFNKEKGEFEFRPGPIFAHVILADEINRTSPRTQSALLEAMAEKQVSLDNRTYPLPSPFMVL ATQNPLEYHGTYPLPESQLDRFLVRLSIGYPSPEVERALLLQRQQAEPVEALQPVLSLAELREIQAAVDQVYLDGSLADY LLQVVQATRASRLLRAGVSTRGALALARAARAQALVRGRSFCLPEDLQALFVPVLAHRISLAGSGDMTSNRRQEAEAVIR DIVATVEPPV
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36066; Mature: 35935
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVGTLSGSARIPAERLQTLRQQIGKLIANVESVFQGKPRVVQAVVTALVAEGHVLLED CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEC VPGVGKTTLARAIARSLGAKFQRIQFTSDLLPTDILGLTLFNKEKGEFEFRPGPIFAHVI CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHEEECCCCCCEEECCCCEEEEEE LADEINRTSPRTQSALLEAMAEKQVSLDNRTYPLPSPFMVLATQNPLEYHGTYPLPESQL EHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHHH DRFLVRLSIGYPSPEVERALLLQRQQAEPVEALQPVLSLAELREIQAAVDQVYLDGSLAD HHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH YLLQVVQATRASRLLRAGVSTRGALALARAARAQALVRGRSFCLPEDLQALFVPVLAHRI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH SLAGSGDMTSNRRQEAEAVIRDIVATVEPPV HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASVGTLSGSARIPAERLQTLRQQIGKLIANVESVFQGKPRVVQAVVTALVAEGHVLLED CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEC VPGVGKTTLARAIARSLGAKFQRIQFTSDLLPTDILGLTLFNKEKGEFEFRPGPIFAHVI CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHEEECCCCCCEEECCCCEEEEEE LADEINRTSPRTQSALLEAMAEKQVSLDNRTYPLPSPFMVLATQNPLEYHGTYPLPESQL EHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCHHHH DRFLVRLSIGYPSPEVERALLLQRQQAEPVEALQPVLSLAELREIQAAVDQVYLDGSLAD HHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH YLLQVVQATRASRLLRAGVSTRGALALARAARAQALVRGRSFCLPEDLQALFVPVLAHRI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH SLAGSGDMTSNRRQEAEAVIRDIVATVEPPV HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]