Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605909

Identifier: 86605909

GI number: 86605909

Start: 1237389

End: 1237547

Strand: Reverse

Name: 86605909

Synonym: CYA_1225

Alternate gene names: NA

Gene position: 1237547-1237389 (Counterclockwise)

Preceding gene: 86605912

Following gene: 86605907

Centisome position: 42.2

GC content: 56.6

Gene sequence:

>159_bases
ATGGAATGCAAAGGAAGCAATTCAAGAGGCAATGGGTTTCAGGATAACCCAAAACTTGACAGGGATCCCAGCCCCTCTCG
TCCGCCTCGGCGGGAAGAGGTACTCACCCTCTTGAGAGGAGGCCAAGCCCAGGGCATCGACACCGGCAGCTTCCTCTAG

Upstream 100 bases:

>100_bases
CTGTCCCGGTCGAAAGTCAAGGCTTTGCGCCTCCAGAGCCTTGGCAAAATCTTCCGAAGAAAACGTATCGGCAGCCTGAG
AGCGAGGGGAGCGAAAGGTC

Downstream 100 bases:

>100_bases
ATGTAGTACATCAACCTGGCCTGTTGCTGTTGCGCCTGCCGGTCGCAGAGGTCTTGCAAGGTCGTTTTTTGGAGAATGCC
CACCGCTGCCGCCTGGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MECKGSNSRGNGFQDNPKLDRDPSPSRPPRREEVLTLLRGGQAQGIDTGSFL

Sequences:

>Translated_52_residues
MECKGSNSRGNGFQDNPKLDRDPSPSRPPRREEVLTLLRGGQAQGIDTGSFL
>Mature_52_residues
MECKGSNSRGNGFQDNPKLDRDPSPSRPPRREEVLTLLRGGQAQGIDTGSFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5686; Mature: 5686

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECKGSNSRGNGFQDNPKLDRDPSPSRPPRREEVLTLLRGGQAQGIDTGSFL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MECKGSNSRGNGFQDNPKLDRDPSPSRPPRREEVLTLLRGGQAQGIDTGSFL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA