| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605906
Identifier: 86605906
GI number: 86605906
Start: 1235330
End: 1235773
Strand: Reverse
Name: 86605906
Synonym: CYA_1223
Alternate gene names: NA
Gene position: 1235773-1235330 (Counterclockwise)
Preceding gene: 86605907
Following gene: 86605905
Centisome position: 42.14
GC content: 53.83
Gene sequence:
>444_bases ATGTCGGATCCCAATCAAGAAATTAAAGACCTCATCCTGGCTTTGGACAAAAAGCTGGAGGGAATCGACCGCAAGTTGGA AATCCAGGTGACGGAGATCAAAAGCGAGATCCGGCTGGTCAAAACCGACCTGGAAGCCAAGATCGACCTCACTCGCAACG ACCTAGAGAGCAAGATCCAAGGCGCTCGCAACGAGCTGGAAGCCAAGATCGACCTCACTCGCAACGAGCTGGAAGCCAAG ATCGACCTCACTCGCAACGAGCTGGAAGCCAAGATCGACCTCAGCCGTAGCAGCCTGGAAGTGAAAATCGCGGAGCTAAG CGGCAAAATGGATGGCTACAGCAAGCGGCTTGACCAACAGGAGTTCATCAGCCGCGGCGCGATCGTGGCCCTAGTCGTTG GGGTGGCCTCAGGGTTTATCAAGTATCTTTTCTTCAGCAATTGA
Upstream 100 bases:
>100_bases AGGCCGTCATCCGCGACATCGTGGCAACGGTTGAGCCGCCAGTTTGAGGAGGGATCCCTTAGGCGATAATAGGAGCCAGC GGTCTTGGGCAGAACTGCGG
Downstream 100 bases:
>100_bases TTGGAGTTTGACCTGAGTTGCCTTGGGTTCCTCCCCAAAACCTGCAAGCGGCGGCGGGTCAGCACTCCTGGAATTGGTCG AGGGCACGACACAGCTCCGG
Product: Bdr protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSDPNQEIKDLILALDKKLEGIDRKLEIQVTEIKSEIRLVKTDLEAKIDLTRNDLESKIQGARNELEAKIDLTRNELEAK IDLTRNELEAKIDLSRSSLEVKIAELSGKMDGYSKRLDQQEFISRGAIVALVVGVASGFIKYLFFSN
Sequences:
>Translated_147_residues MSDPNQEIKDLILALDKKLEGIDRKLEIQVTEIKSEIRLVKTDLEAKIDLTRNDLESKIQGARNELEAKIDLTRNELEAK IDLTRNELEAKIDLSRSSLEVKIAELSGKMDGYSKRLDQQEFISRGAIVALVVGVASGFIKYLFFSN >Mature_146_residues SDPNQEIKDLILALDKKLEGIDRKLEIQVTEIKSEIRLVKTDLEAKIDLTRNDLESKIQGARNELEAKIDLTRNELEAKI DLTRNELEAKIDLSRSSLEVKIAELSGKMDGYSKRLDQQEFISRGAIVALVVGVASGFIKYLFFSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16621; Mature: 16490
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPNQEIKDLILALDKKLEGIDRKLEIQVTEIKSEIRLVKTDLEAKIDLTRNDLESKIQ CCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCHHEEECCHHHHHHHHH GARNELEAKIDLTRNELEAKIDLTRNELEAKIDLSRSSLEVKIAELSGKMDGYSKRLDQQ HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHEECCCCCCEEEEEHHCCCCCHHHHHCCHH EFISRGAIVALVVGVASGFIKYLFFSN HHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDPNQEIKDLILALDKKLEGIDRKLEIQVTEIKSEIRLVKTDLEAKIDLTRNDLESKIQ CCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCHHEEECCHHHHHHHHH GARNELEAKIDLTRNELEAKIDLTRNELEAKIDLSRSSLEVKIAELSGKMDGYSKRLDQQ HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHEECCCCCCEEEEEHHCCCCCHHHHHCCHH EFISRGAIVALVVGVASGFIKYLFFSN HHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA