| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is phoA [H]
Identifier: 86605488
GI number: 86605488
Start: 785884
End: 787233
Strand: Reverse
Name: phoA [H]
Synonym: CYA_0781
Alternate gene names: 86605488
Gene position: 787233-785884 (Counterclockwise)
Preceding gene: 86605489
Following gene: 86605484
Centisome position: 26.84
GC content: 58.89
Gene sequence:
>1350_bases GTGTTAGCTACGCGTAGCTATTCTCTGAGGGCAGCGTTGGCTGCAACTTTGTGTCTGCTGTCCTCGTCAGTTTTTTCCTC CAGTGTGGCTCAAGCGGCGCCTAAGCCAACCGGCAACGGTGCAATCTTCTTTCACCCAGATGGAACCTCAGCTTCCCACT GGGACATCACACGCATTCTCTACTACGGCCCCGATGGCTTTCTGAACTGGGATCGTCTCCCCGTGATTGCCCCCTATCGC GGGCACCTTCTCGACCAGCTTGGGGGAACTTCCAACGCCGGAGCGGTGACCCATGCCACGGGAACCCGTGTCCACGCCAA GAGCTTTGGGTTGGATCCGGACGGCAAAGAGTACCCCTCTGCCAACGGCACCCTGAACACGATCATGGAAGAGGCCGTGG CGGCAGGCTTGGGTACGGCTCTGGTGCAAACGGGATCCATCATTGAGCCGGGGACAGCTGCCTTCGTTGCCGAAGTTGCC AAGCGCAGCGACTATGAGGAGATTGCCCTGCAGGTGGTGGAGTCAGGGGTAGACATCATCCTCGGCGCTGGCGAGGAATG GCTGCTGCCGGAAGGTGTCCAGGGCCGCTTTGGCAAAGGGAAGCGCAAGGATGGCCGCAACCTGATTGAGGAGGCCAAGA AAAAGGGGTACGCCGTTGTCTACACCCGCGACGAGCTGCTCAAGCTGCCGGCAGATGTCTCCAAAGTTTTGGGGGTGTTC AACGTCGAGGACACCTTCTACGACAAGCCTGAAGAAGAGTTGCGGAAAGAAAACTTGCCCAACTACATCGCCAGCGCCCC CACCATTGCCGAGATGACCGAATTTGCCCTGGCGCGGATCTCCCGCAATCCTAAGGGCTTCTTCGCCGTCATCGAAGAAG AGGGCACTGATAACATGTGCAACAACCTCAATGCCTCTGGCTGCCTGGAGGCCATGAAGCGGGCCGACGATGCCATCGGG GTGATTCTCAACTTTATCGAGAAGAATCCCAAGACCTTCATGATCACCACCAGCGACAGCAATGCCGGTGGCATGCAGTT GGTGGATGTCGAGTCCGCCGATGAGCCGTTGCCCCCTACTGACCCCGAAGGCAGTGGTGCCCCCATTGACGGAGTTGACG GCACGGGCACAAAGCCGTTTATTTCTGCTCCTGACAAGAATGGCAAGCGCTTTCCCTTTGCCGTGGCTTGGGCTACCGGA GATGACGTGGGCAGCGGCGTCATCGCTCGCGCTGCGGGCTTGAAGGCCCAAGAGCTGGTGCCGACCACCGGGATCCTGAA CACGGACATTTATCGGATTCTCTACTTCGTGCTCTTCGGGGAGCAGATCCCCAGCGAGCTCAAGCCGTAG
Upstream 100 bases:
>100_bases CGCTTCAGGCACGTTTCGCGCTGCTGCATTGCTATGCCCTTGCAAACTCATCTGAAGCTGTGTTACGTTTTTCAACGTTC AGCTTCGAAGGAGCAAGGGC
Downstream 100 bases:
>100_bases TCTCAGGCAGCCCGGCCTTGGCTTGGAACTTCTGGGGACGGAGGGGATCCCGGCGATCCCCTTTTTATTTACGCAACGCT GTCGCGAACGCGCCGCTCCA
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MLATRSYSLRAALAATLCLLSSSVFSSSVAQAAPKPTGNGAIFFHPDGTSASHWDITRILYYGPDGFLNWDRLPVIAPYR GHLLDQLGGTSNAGAVTHATGTRVHAKSFGLDPDGKEYPSANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAEVA KRSDYEEIALQVVESGVDIILGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMCNNLNASGCLEAMKRADDAIG VILNFIEKNPKTFMITTSDSNAGGMQLVDVESADEPLPPTDPEGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATG DDVGSGVIARAAGLKAQELVPTTGILNTDIYRILYFVLFGEQIPSELKP
Sequences:
>Translated_449_residues MLATRSYSLRAALAATLCLLSSSVFSSSVAQAAPKPTGNGAIFFHPDGTSASHWDITRILYYGPDGFLNWDRLPVIAPYR GHLLDQLGGTSNAGAVTHATGTRVHAKSFGLDPDGKEYPSANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAEVA KRSDYEEIALQVVESGVDIILGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMCNNLNASGCLEAMKRADDAIG VILNFIEKNPKTFMITTSDSNAGGMQLVDVESADEPLPPTDPEGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATG DDVGSGVIARAAGLKAQELVPTTGILNTDIYRILYFVLFGEQIPSELKP >Mature_449_residues MLATRSYSLRAALAATLCLLSSSVFSSSVAQAAPKPTGNGAIFFHPDGTSASHWDITRILYYGPDGFLNWDRLPVIAPYR GHLLDQLGGTSNAGAVTHATGTRVHAKSFGLDPDGKEYPSANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAEVA KRSDYEEIALQVVESGVDIILGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMCNNLNASGCLEAMKRADDAIG VILNFIEKNPKTFMITTSDSNAGGMQLVDVESADEPLPPTDPEGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATG DDVGSGVIARAAGLKAQELVPTTGILNTDIYRILYFVLFGEQIPSELKP
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=317, Percent_Identity=28.7066246056782, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI94721246, Length=313, Percent_Identity=27.7955271565495, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI157266292, Length=313, Percent_Identity=27.7955271565495, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI116734717, Length=317, Percent_Identity=25.2365930599369, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI294660770, Length=316, Percent_Identity=25, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI48994877, Length=355, Percent_Identity=27.3239436619718, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320689, Length=355, Percent_Identity=26.7605633802817, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24585213, Length=354, Percent_Identity=25.7062146892655, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI21358067, Length=315, Percent_Identity=25.3968253968254, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI85725200, Length=330, Percent_Identity=24.2424242424242, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI85815833, Length=330, Percent_Identity=24.2424242424242, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355151, Length=384, Percent_Identity=23.6979166666667, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 47879; Mature: 47879
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATRSYSLRAALAATLCLLSSSVFSSSVAQAAPKPTGNGAIFFHPDGTSASHWDITRIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEE YYGPDGFLNWDRLPVIAPYRGHLLDQLGGTSNAGAVTHATGTRVHAKSFGLDPDGKEYPS EECCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEEEECCCCEEEHHHCCCCCCCCCCCC ANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAEVAKRSDYEEIALQVVESGVDII CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEE LGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHCCHHHHHHHHEE NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMC CCCHHHCCCCHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH NNLNASGCLEAMKRADDAIGVILNFIEKNPKTFMITTSDSNAGGMQLVDVESADEPLPPT HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCC DPEGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATGDDVGSGVIARAAGLKAQELV CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHC PTTGILNTDIYRILYFVLFGEQIPSELKP CCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLATRSYSLRAALAATLCLLSSSVFSSSVAQAAPKPTGNGAIFFHPDGTSASHWDITRIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEE YYGPDGFLNWDRLPVIAPYRGHLLDQLGGTSNAGAVTHATGTRVHAKSFGLDPDGKEYPS EECCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEEEECCCCEEEHHHCCCCCCCCCCCC ANGTLNTIMEEAVAAGLGTALVQTGSIIEPGTAAFVAEVAKRSDYEEIALQVVESGVDII CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEE LGAGEEWLLPEGVQGRFGKGKRKDGRNLIEEAKKKGYAVVYTRDELLKLPADVSKVLGVF EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHCCHHHHHHHHEE NVEDTFYDKPEEELRKENLPNYIASAPTIAEMTEFALARISRNPKGFFAVIEEEGTDNMC CCCHHHCCCCHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHH NNLNASGCLEAMKRADDAIGVILNFIEKNPKTFMITTSDSNAGGMQLVDVESADEPLPPT HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCC DPEGSGAPIDGVDGTGTKPFISAPDKNGKRFPFAVAWATGDDVGSGVIARAAGLKAQELV CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHC PTTGILNTDIYRILYFVLFGEQIPSELKP CCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]