The gene/protein map for NC_006361 is currently unavailable.
Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605220

Identifier: 86605220

GI number: 86605220

Start: 520081

End: 520668

Strand: Reverse

Name: 86605220

Synonym: CYA_0503

Alternate gene names: NA

Gene position: 520668-520081 (Counterclockwise)

Preceding gene: 86605221

Following gene: 86605219

Centisome position: 17.75

GC content: 60.71

Gene sequence:

>588_bases
ATGGAGCAACCCCCCGCCAAGACCTACCTAGATTTACAGGCTGCGCGACGGGGCCAGGTGGATCTGGAAACCGACCGGGA
GACTTTGGCCCGTTACCTGCGCGGCCATGGCCAGTGGATCCAGCGCTGCTTCCGGCCACTCCAGGTGGAGCCCCTCTCTG
CCGAAATCTATAGGCTGCAGTTTTTCCGCATGGGCGGGCTGGGGTTTGAGCTGGAGCCCAGCTTTGGGGTGAAGATCTGG
CCAGAGGAAGATTACCTGTTTCGGCTGACTTCCATTGAGCTGCCGGGGGATGCCGCCCTGCCCTACTGGGTGGATTGTCG
GGCCAGCTTCCGGCTGGAAGAACTACCGGGATCCCTGGCCACCACCCGCGTCCACTGGGATCTCCAGCTGAATATCCGGC
TGCATTTGCCCAAGTTTTTGCAGGTTCTGCCGCGCAAGTTGGTTCAGAAAGTGGGCAGCCAGGTGGTGCAGCAGGTTACC
CGCGGCCTCAGCGATCGCTTTACCCACAATGTCTGCAGCGATTTCTATGGCTCCATTGGCCGTTCCCATCACCCCTATCG
CTTGGTTGCGGTGGAAGATGGGGCGTGA

Upstream 100 bases:

>100_bases
CATCAGGTGGATATTCGGGATGTCTATCGCCAGCTCCAAGCCCGCCGTTCCCCTCAGTGAAGGTGCTCTGTCCGAGGAGG
GGGAGCTGCCTTTGGAGGAG

Downstream 100 bases:

>100_bases
TATGGTAAGGGGCACATGTGTTGCGGGCAGGCTGCTTGGTCCTTCCCGGCAACGGGCGATGGGGTTCGCCGCAACCGCCT
CAGGCAGATCCTAGGGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MEQPPAKTYLDLQAARRGQVDLETDRETLARYLRGHGQWIQRCFRPLQVEPLSAEIYRLQFFRMGGLGFELEPSFGVKIW
PEEDYLFRLTSIELPGDAALPYWVDCRASFRLEELPGSLATTRVHWDLQLNIRLHLPKFLQVLPRKLVQKVGSQVVQQVT
RGLSDRFTHNVCSDFYGSIGRSHHPYRLVAVEDGA

Sequences:

>Translated_195_residues
MEQPPAKTYLDLQAARRGQVDLETDRETLARYLRGHGQWIQRCFRPLQVEPLSAEIYRLQFFRMGGLGFELEPSFGVKIW
PEEDYLFRLTSIELPGDAALPYWVDCRASFRLEELPGSLATTRVHWDLQLNIRLHLPKFLQVLPRKLVQKVGSQVVQQVT
RGLSDRFTHNVCSDFYGSIGRSHHPYRLVAVEDGA
>Mature_195_residues
MEQPPAKTYLDLQAARRGQVDLETDRETLARYLRGHGQWIQRCFRPLQVEPLSAEIYRLQFFRMGGLGFELEPSFGVKIW
PEEDYLFRLTSIELPGDAALPYWVDCRASFRLEELPGSLATTRVHWDLQLNIRLHLPKFLQVLPRKLVQKVGSQVVQQVT
RGLSDRFTHNVCSDFYGSIGRSHHPYRLVAVEDGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22538; Mature: 22538

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQPPAKTYLDLQAARRGQVDLETDRETLARYLRGHGQWIQRCFRPLQVEPLSAEIYRLQ
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHEEE
FFRMGGLGFELEPSFGVKIWPEEDYLFRLTSIELPGDAALPYWVDCRASFRLEELPGSLA
EEEECCCCEEECCCCCEEEECCCCEEEEEEEEECCCCCCCCEEEECCCCCCHHHCCCCEE
TTRVHWDLQLNIRLHLPKFLQVLPRKLVQKVGSQVVQQVTRGLSDRFTHNVCSDFYGSIG
EEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RSHHPYRLVAVEDGA
CCCCCEEEEEEECCC
>Mature Secondary Structure
MEQPPAKTYLDLQAARRGQVDLETDRETLARYLRGHGQWIQRCFRPLQVEPLSAEIYRLQ
CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHEEE
FFRMGGLGFELEPSFGVKIWPEEDYLFRLTSIELPGDAALPYWVDCRASFRLEELPGSLA
EEEECCCCEEECCCCCEEEECCCCEEEEEEEEECCCCCCCCEEEECCCCCCHHHCCCCEE
TTRVHWDLQLNIRLHLPKFLQVLPRKLVQKVGSQVVQQVTRGLSDRFTHNVCSDFYGSIG
EEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RSHHPYRLVAVEDGA
CCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA