| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605074
Identifier: 86605074
GI number: 86605074
Start: 372868
End: 374061
Strand: Reverse
Name: 86605074
Synonym: CYA_0354
Alternate gene names: NA
Gene position: 374061-372868 (Counterclockwise)
Preceding gene: 86605075
Following gene: 86605072
Centisome position: 12.75
GC content: 64.91
Gene sequence:
>1194_bases ATGCCTGCTTGGGATCCCTCCTGGGCGCAGCGCCTGGCGCTGGTGCACGAGTATTTGATCTGGCCAGGGGGATCGGAAAA GGTTTTGCAGGAGCTCCTTGCCTTTGCCCCACAGGCACCTCTCTACGTCAGCCTCTTCTCGTCCCACACCTTGCCGCCGA GCTGGCAGCAGCGGTCGGTTTACACCTCGTTTTTGCAGGGCTGGGCCCGCTGGCTGGGGGTGCTGCGGCGCAACTATCAC AGCCGCCTTAAGTACCTGCTGCCCTGGATGCCCTTGGCCTACGAGAGCTTTGACTTCTCCGCCTATGACTGCGTCATCTC CAGCAGCCATGCCTTTGCCAAAGGGATCCTGACAGGGCCTTCCACTCTGCACCTTAGCTACATCCACAGCCCGCCCCGTT ACCTCTGGGAAAACCAGGAGCTCTATCTGGAGCGGGAGGGGTTGACGGGGATCCGCCCGCTTGCCGCCCTCAGCCGCTGG CTGTTGCACCGCCTGCGCCAGTGGGACTTTGTGGCAGCCCAGCGGCCAGACCTATTGATTGCCAACTCGCAGCACATCCG CCGGCGCCTGGCCAAGCTCTACCGCCGCGAGGCTGTGGTTATCTATCCGCCGGTGCCGCTGCAGGGGTTTGAGCCGGTAA CCCATCCCCAAGCCGACTACGACCTGGTGGTGGGCCGGCTGGTGCCCTACAAGCGGGTGGATTTGGCGATCGCTGCCTGT AAGCAGCTGGGCCGCCGCCTGGTAGTGGTGGGGGAAGGGCCGGAGCTGCCGCGACTGAAGCAACTGGCAGGGCCGCAAGT GGAGTTTTTGCCCCACCAGCCCCAAGACCGCCTGCAGGAGCTGCTGGCCAATTGCCGGCTGCTGCTGTTTCCCTGGGAAG AGGATTTTGGCCTGGTGGCGGTGGAGGCGCAAGCCTGTGGTCGTCCTGTGGTCGCCCTGAACCGGGGAGGCACCCGCGAG ACCGTCATCCACGGCCAGACGGGGATCCTCATCCCCGAAGCCAGGGTGGAAGCCCTCGTCGAAGGGCTGCGCCAGGCGGA GCGCCAGGAATGGGATCCGCAGCGGATTCGGACCCATGCCTTGCAATTTGCGCCGGAGCGGTTCCACGCCCAGTTGGGAT CCCTGCTGCGCTGGGCCTGGCCCCGTTTCCAGGCGGGAGAGCGCTTGGATCCGCAAGAATGGCAGCCTCAGTAG
Upstream 100 bases:
>100_bases TCCGCGAGATCTACGCCTACATCAGCGAACGGCTGGACGAGAAAGCCAGGCAAGTAAGCGGGCCCATCGGCAAAAGGTCC CCCTCGACCCAAGCCTAGCC
Downstream 100 bases:
>100_bases GGCCGCCGCTGTACAAAAGCCGGCAACTCGATGCGGCTGCGGCTGCCCCCTTCTCCCCCAGCCCGTGCAGCCGCCAAGGC GGAGCGTCTCAGCAGCTTCT
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MPAWDPSWAQRLALVHEYLIWPGGSEKVLQELLAFAPQAPLYVSLFSSHTLPPSWQQRSVYTSFLQGWARWLGVLRRNYH SRLKYLLPWMPLAYESFDFSAYDCVISSSHAFAKGILTGPSTLHLSYIHSPPRYLWENQELYLEREGLTGIRPLAALSRW LLHRLRQWDFVAAQRPDLLIANSQHIRRRLAKLYRREAVVIYPPVPLQGFEPVTHPQADYDLVVGRLVPYKRVDLAIAAC KQLGRRLVVVGEGPELPRLKQLAGPQVEFLPHQPQDRLQELLANCRLLLFPWEEDFGLVAVEAQACGRPVVALNRGGTRE TVIHGQTGILIPEARVEALVEGLRQAERQEWDPQRIRTHALQFAPERFHAQLGSLLRWAWPRFQAGERLDPQEWQPQ
Sequences:
>Translated_397_residues MPAWDPSWAQRLALVHEYLIWPGGSEKVLQELLAFAPQAPLYVSLFSSHTLPPSWQQRSVYTSFLQGWARWLGVLRRNYH SRLKYLLPWMPLAYESFDFSAYDCVISSSHAFAKGILTGPSTLHLSYIHSPPRYLWENQELYLEREGLTGIRPLAALSRW LLHRLRQWDFVAAQRPDLLIANSQHIRRRLAKLYRREAVVIYPPVPLQGFEPVTHPQADYDLVVGRLVPYKRVDLAIAAC KQLGRRLVVVGEGPELPRLKQLAGPQVEFLPHQPQDRLQELLANCRLLLFPWEEDFGLVAVEAQACGRPVVALNRGGTRE TVIHGQTGILIPEARVEALVEGLRQAERQEWDPQRIRTHALQFAPERFHAQLGSLLRWAWPRFQAGERLDPQEWQPQ >Mature_396_residues PAWDPSWAQRLALVHEYLIWPGGSEKVLQELLAFAPQAPLYVSLFSSHTLPPSWQQRSVYTSFLQGWARWLGVLRRNYHS RLKYLLPWMPLAYESFDFSAYDCVISSSHAFAKGILTGPSTLHLSYIHSPPRYLWENQELYLEREGLTGIRPLAALSRWL LHRLRQWDFVAAQRPDLLIANSQHIRRRLAKLYRREAVVIYPPVPLQGFEPVTHPQADYDLVVGRLVPYKRVDLAIAACK QLGRRLVVVGEGPELPRLKQLAGPQVEFLPHQPQDRLQELLANCRLLLFPWEEDFGLVAVEAQACGRPVVALNRGGTRET VIHGQTGILIPEARVEALVEGLRQAERQEWDPQRIRTHALQFAPERFHAQLGSLLRWAWPRFQAGERLDPQEWQPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45755; Mature: 45624
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWDPSWAQRLALVHEYLIWPGGSEKVLQELLAFAPQAPLYVSLFSSHTLPPSWQQRSV CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEHHCCCCCCCHHHHHH YTSFLQGWARWLGVLRRNYHSRLKYLLPWMPLAYESFDFSAYDCVISSSHAFAKGILTGP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHEEECCCHHHHHEECCC STLHLSYIHSPPRYLWENQELYLEREGLTGIRPLAALSRWLLHRLRQWDFVAAQRPDLLI CEEEEEEECCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEE ANSQHIRRRLAKLYRREAVVIYPPVPLQGFEPVTHPQADYDLVVGRLVPYKRVDLAIAAC ECCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH KQLGRRLVVVGEGPELPRLKQLAGPQVEFLPHQPQDRLQELLANCRLLLFPWEEDFGLVA HHHCCEEEEEECCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHCCEEEEEECCCCCCEEE VEAQACGRPVVALNRGGTRETVIHGQTGILIPEARVEALVEGLRQAERQEWDPQRIRTHA EEHHHCCCCEEEECCCCCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHH LQFAPERFHAQLGSLLRWAWPRFQAGERLDPQEWQPQ HHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAWDPSWAQRLALVHEYLIWPGGSEKVLQELLAFAPQAPLYVSLFSSHTLPPSWQQRSV CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEHHCCCCCCCHHHHHH YTSFLQGWARWLGVLRRNYHSRLKYLLPWMPLAYESFDFSAYDCVISSSHAFAKGILTGP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHEEECCCHHHHHEECCC STLHLSYIHSPPRYLWENQELYLEREGLTGIRPLAALSRWLLHRLRQWDFVAAQRPDLLI CEEEEEEECCCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCEEE ANSQHIRRRLAKLYRREAVVIYPPVPLQGFEPVTHPQADYDLVVGRLVPYKRVDLAIAAC ECCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH KQLGRRLVVVGEGPELPRLKQLAGPQVEFLPHQPQDRLQELLANCRLLLFPWEEDFGLVA HHHCCEEEEEECCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHCCEEEEEECCCCCCEEE VEAQACGRPVVALNRGGTRETVIHGQTGILIPEARVEALVEGLRQAERQEWDPQRIRTHA EEHHHCCCCEEEECCCCCCCEEEECCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHH LQFAPERFHAQLGSLLRWAWPRFQAGERLDPQEWQPQ HHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]