Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605075

Identifier: 86605075

GI number: 86605075

Start: 374064

End: 374477

Strand: Reverse

Name: 86605075

Synonym: CYA_0356

Alternate gene names: NA

Gene position: 374477-374064 (Counterclockwise)

Preceding gene: 86605076

Following gene: 86605074

Centisome position: 12.77

GC content: 60.14

Gene sequence:

>414_bases
ATGGCGATCAAAGAAGAAGTTTTTTTTGAGGGCGGCCCTCACACGGGCGATCTGGTGTTGAACTCCTTCCTCGGCCTCAC
CCTCGTTGGCTTGCCTCTGTTTGTGGGCGCCCTGGTGCGCAAGCTTTGGGTTCACTACCGGATAACCAACCGTCGCATCA
CTGTGATCGGCGGCTGGGGCGGCAAGGAGCGCTCTGATGTCATTTACAAAGAGATTGCCAAGGTGGTGACGGTGCCACGG
GGCCTAGGCACCTGGGGCGATATGGTGCTCACCCTCAAAGACGGCAGCCGCCTAGAGATGCGGGCAGTGCCCCGCTTCCG
CGAGATCTACGCCTACATCAGCGAACGGCTGGACGAGAAAGCCAGGCAAGTAAGCGGGCCCATCGGCAAAAGGTCCCCCT
CGACCCAAGCCTAG

Upstream 100 bases:

>100_bases
TCCACCGCTAACTCGGCAGACAGTTGGGGTGAGAAACCGTTTAGCTTAAGATTGTTTTTAGCATTGTTGATGCTGACATT
CGACATTAGGTGGGCTGAGC

Downstream 100 bases:

>100_bases
CCATGCCTGCTTGGGATCCCTCCTGGGCGCAGCGCCTGGCGCTGGTGCACGAGTATTTGATCTGGCCAGGGGGATCGGAA
AAGGTTTTGCAGGAGCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAIKEEVFFEGGPHTGDLVLNSFLGLTLVGLPLFVGALVRKLWVHYRITNRRITVIGGWGGKERSDVIYKEIAKVVTVPR
GLGTWGDMVLTLKDGSRLEMRAVPRFREIYAYISERLDEKARQVSGPIGKRSPSTQA

Sequences:

>Translated_137_residues
MAIKEEVFFEGGPHTGDLVLNSFLGLTLVGLPLFVGALVRKLWVHYRITNRRITVIGGWGGKERSDVIYKEIAKVVTVPR
GLGTWGDMVLTLKDGSRLEMRAVPRFREIYAYISERLDEKARQVSGPIGKRSPSTQA
>Mature_136_residues
AIKEEVFFEGGPHTGDLVLNSFLGLTLVGLPLFVGALVRKLWVHYRITNRRITVIGGWGGKERSDVIYKEIAKVVTVPRG
LGTWGDMVLTLKDGSRLEMRAVPRFREIYAYISERLDEKARQVSGPIGKRSPSTQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15313; Mature: 15182

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKEEVFFEGGPHTGDLVLNSFLGLTLVGLPLFVGALVRKLWVHYRITNRRITVIGGWG
CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCC
GKERSDVIYKEIAKVVTVPRGLGTWGDMVLTLKDGSRLEMRAVPRFREIYAYISERLDEK
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEHHHCHHHHHHHHHHHHHHHHH
ARQVSGPIGKRSPSTQA
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AIKEEVFFEGGPHTGDLVLNSFLGLTLVGLPLFVGALVRKLWVHYRITNRRITVIGGWG
CCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCC
GKERSDVIYKEIAKVVTVPRGLGTWGDMVLTLKDGSRLEMRAVPRFREIYAYISERLDEK
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEHHHCHHHHHHHHHHHHHHHHH
ARQVSGPIGKRSPSTQA
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA