| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604986
Identifier: 86604986
GI number: 86604986
Start: 272214
End: 272795
Strand: Reverse
Name: 86604986
Synonym: CYA_0265
Alternate gene names: NA
Gene position: 272795-272214 (Counterclockwise)
Preceding gene: 86604990
Following gene: 86604985
Centisome position: 9.3
GC content: 57.39
Gene sequence:
>582_bases TTGCTGCGAGCCACGGGACGGACGGGTGCTGGCAATTGTTTTGAGATCGGCCAAGCTTTTTTGACGGTTACAAGAACCCT GGGGAGCAGGCAAAACGAGCAGAAGCTGTCCGCTTTGGATTCTCCTGCGATCGGTATGATCGAAGGGATACCTTTAGCCT ATCCAACCATGGGGCAACACTGGCAACGGCTTCAGTTCTTTTCTCGTCAGATATTTTTAAAGGGAGGCCTTCTGTTTCTG ATCCTGGCTGGCCTGATCTTGGCAACAGGACTGCCCCTGGTCGCGTCCAGCGCTTGGGCGGCCACCCAGCCGGCACTATC CGGCAAACTGACGGGGCCGGAGTGGCGCCAGGCGGATCCTGAGGCCAAGCAGGCCTTTTGTCGCAAAGCCTTTCAGGCCT TTCGGGCCTCTCCTGCCCAGAGCTACATCATCAGCTCCAACGTGCAGGCTTTGACCCCAGAAGGTTTGTGTCAGCGGCTG GATCAGTTCTATCAGTACGCCATCCACGACGAGATCCCGCTCAACCAGGCAGCCAACATTGCCCCCCTGCTTTTTTCAGA TCAGCCCCTGGAGCAGCCCTGA
Upstream 100 bases:
>100_bases TTGGCGGGCGGCGACCTGAAAATGTCGCCAACCCATCACCGGCTGAACGGAAGTCCACTTGGAGCCGAGGAGGTGGGGAA AACGCTGTTTTTGGCGGGGT
Downstream 100 bases:
>100_bases TCCGATAGGGATCCGGAAAACCGCCGGCAAACGGATCCCGGCGCCTGAGGGAACCGCTTGAAACAGGCGCGCTCTTCTGG GCCCCGTTCCTGGGGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLRATGRTGAGNCFEIGQAFLTVTRTLGSRQNEQKLSALDSPAIGMIEGIPLAYPTMGQHWQRLQFFSRQIFLKGGLLFL ILAGLILATGLPLVASSAWAATQPALSGKLTGPEWRQADPEAKQAFCRKAFQAFRASPAQSYIISSNVQALTPEGLCQRL DQFYQYAIHDEIPLNQAANIAPLLFSDQPLEQP
Sequences:
>Translated_193_residues MLRATGRTGAGNCFEIGQAFLTVTRTLGSRQNEQKLSALDSPAIGMIEGIPLAYPTMGQHWQRLQFFSRQIFLKGGLLFL ILAGLILATGLPLVASSAWAATQPALSGKLTGPEWRQADPEAKQAFCRKAFQAFRASPAQSYIISSNVQALTPEGLCQRL DQFYQYAIHDEIPLNQAANIAPLLFSDQPLEQP >Mature_193_residues MLRATGRTGAGNCFEIGQAFLTVTRTLGSRQNEQKLSALDSPAIGMIEGIPLAYPTMGQHWQRLQFFSRQIFLKGGLLFL ILAGLILATGLPLVASSAWAATQPALSGKLTGPEWRQADPEAKQAFCRKAFQAFRASPAQSYIISSNVQALTPEGLCQRL DQFYQYAIHDEIPLNQAANIAPLLFSDQPLEQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21077; Mature: 21077
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRATGRTGAGNCFEIGQAFLTVTRTLGSRQNEQKLSALDSPAIGMIEGIPLAYPTMGQH CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCCCCCCCHHHH WQRLQFFSRQIFLKGGLLFLILAGLILATGLPLVASSAWAATQPALSGKLTGPEWRQADP HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCH EAKQAFCRKAFQAFRASPAQSYIISSNVQALTPEGLCQRLDQFYQYAIHDEIPLNQAANI HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC APLLFSDQPLEQP CCEEECCCCCCCC >Mature Secondary Structure MLRATGRTGAGNCFEIGQAFLTVTRTLGSRQNEQKLSALDSPAIGMIEGIPLAYPTMGQH CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCCCCCCCHHHH WQRLQFFSRQIFLKGGLLFLILAGLILATGLPLVASSAWAATQPALSGKLTGPEWRQADP HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCH EAKQAFCRKAFQAFRASPAQSYIISSNVQALTPEGLCQRLDQFYQYAIHDEIPLNQAANI HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC APLLFSDQPLEQP CCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA