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The map label for this gene is 86604990

Identifier: 86604990

GI number: 86604990

Start: 275783

End: 277948

Strand: Reverse

Name: 86604990

Synonym: CYA_0269

Alternate gene names: NA

Gene position: 277948-275783 (Counterclockwise)

Preceding gene: 86604991

Following gene: 86604986

Centisome position: 9.48

GC content: 64.08

Gene sequence:

>2166_bases
ATGGCCGAAGACATTATCCAGATTCAGGATCAGTACTACATCCGCGCCAGCGCTTCGCTGGTGGAGGCGCGTCCCCACGT
CCTCAAGCAGGACAACTGCTTTGCCATCTTTGACCGGCTGGGCAACATGCGCCCCCTCGGCATCCGGGATCACGGCCTGT
TTCGGGATGATACCCGCTTTTTGTCGCGGCTGGTCTTGGATTTGCAGGGGAAGCAGTTTTTGTTGCTTAGCTCGGAGGTG
CGAGAAGACAAGGATATTCTGGCGGTGGATCTGACCAACCCCGAGTTCACCACCTCGAAGGGGCAGTTTATCGGTCAAGA
TACCCTGCATGTTCTGCGGACTACTTTTTTGTGGAACAACGTGGCCTACGAGCGGATTCGCATCCACAACTACGGCTCGG
AGCCGTTTCGGGTGCCGCTGACCCTGCGCTTTGAGGCCGATTTTGCCGATATGTTTGAGATTCGCGGCATCCGGCGCTCG
CAGCGGGGACAAGTGCTGCCACCCCAGGTGAGCTCAGAAGGGGTAACTTTGCGCTACCGCGGCCTGGACGGGGTGGAGCG
GCAAACCCAGATCTTGTTTTCTCCTGCGCCGGAGGTGGTCTCGGAAAAGCTGGCGCAGTGGTGGGTGCCGCTGGCGCCCC
AGGAGGAGCGGGATTTGGAGGTGCGGGTAGTCTGCAGCTATGGCGGCGAGGAGATCCCGCTCTTGAGCTACCAGGAGGCC
CTGCAGGCGGAGCGGGAGCATCGGGCGGCGCTAAGAGCTCTGGCCCACCGCATCGACACTGGCAACGCCCAGTTTAACGA
GTGGCTCAACGCCTCGCGGGACGACCTGGTGATGATGCTGGCCCGCACCCCCTACGGGCTCTATCCCCACGCCGGGGTAC
CTTGGTTTGCCACGGTCTTTGGCCGCGACGCGCTGATCACCGCCTTGGCCACCCTCTGGTGGTTTCCCGATTTGGCACGG
GGGGTGCTGCTGTACCTGGCGGCCCACCAGGCCCAGGAGGTGGATCCCAGCCGCGATGCCGAGCCGGGCAAGATCCTGCA
CGAGCAGCGCTACAGCGAGATGGCCAAGACCCGCGAGATCCCCTTTGGCAATTATTTCGGCAGCATCGACGCCACCCCTT
TGTTTGTGGTGCTGGCGGGGCGCTATGTGCGCCGCAGCGGCGATCTCGAGCTGTTGCGGCAGTTGTGGCCGAATATCGAG
GCAGCCCTGAGCTGGATGGACACCTACGGGGATCCCGACGGCGACGGCTTTTTGGAGTATGCCGGCAAGGCGCGGCGGGG
CCTGCGCAACCAAGGCTGGAAAGATTCGGAAGACGCCATCTTCCATGCCGACGGATCCCTGGCGGAGCCGCCCATTGCCC
TGTGCGAGGTGCAGGGCTACGCCTACGAGGCCAAGCGGTTGGCGGCGGAGATGGCGGAGCTGTTGGGGCGGCAGGCGCAG
GCAGCCCAGCTGCGACAGCAAGCAGAAAAGCTGCAGCAGCGGTTTTGGGAGCAGTTTTGGTGCGAGGAGCTGGGGGGGTA
TGTCCTGGCTCTGGACGGGCGCAAGCAGCCCTGCCGCGTGCGCAGCTCCAACATGGGCCACTGCCTGTTTTCCGGGATCG
CCCACCCGCAGCATGCCGAGCGCATTGCCCGCCAACTTGTGGAGCCGGCTTTTTTTAGCGGCTGGGGGATCCGCACGCTG
GCGGAAGGGGAAGGGCGCTACAACCCCATGTCTTACCACAACGGCTCCATCTGGCCCCACGACAACGCCCTCATTGCAGC
CGGGCTCTCCCGCTATGGCTACAAGGCGGAAGCGGCCCAGGTGTTGACGGCCTTGTTCGATGCCAGCCAGTTTCTGGAGC
TGCGGCGGCTGCCGGAGCTGTTCTGTGGCTTTCGCCGGCGCCAGCGGGAGGGCCCCACCCTTTACCCCGTGGCCTGTCTG
CCCCAGTCTTGGGCGGCGGCCAGCGTGTTCCTGCTGCTGCAGGCCTGCCTAGGCCTGGAGATCGACGGCTTGGCCCAGCG
GGTGCACCTGACTCAGCCCACCCTGCCCCTGTGGCTGCCCCATGTTACCCTCGAAAACATTCGGGTGGGGCGCGGATCCC
TGGACATCGGCCTGTATCTCCAGGCAGGAGGGGTGGGGATCAACGTCCTTAGAAGCACGGGGGAGGTGGAGCTGACGGTG
AGGTAG

Upstream 100 bases:

>100_bases
AAAAGGTGGCTTAACAGATGCCGACCCTGCCCAGTGGAAGCTGGTGCTGTTTGAAAACCGCTTTTTCGCCTTATTTGGGC
CAGATATTGGGAAGACCGAG

Downstream 100 bases:

>100_bases
GCTACCGCTCCTGCAGCACGTCCTGGATGGAGAGCTGATCCAGGTTCCAGAGAGGGCCGAGGATGGGGCGGGGATCCACC
CCTTGCAGGCGGTTGCGCAG

Product: glycogen debranching enzyme family protein

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; Amylo-Alpha-1 6-Glucosidase Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 721; Mature: 720

Protein sequence:

>721_residues
MAEDIIQIQDQYYIRASASLVEARPHVLKQDNCFAIFDRLGNMRPLGIRDHGLFRDDTRFLSRLVLDLQGKQFLLLSSEV
REDKDILAVDLTNPEFTTSKGQFIGQDTLHVLRTTFLWNNVAYERIRIHNYGSEPFRVPLTLRFEADFADMFEIRGIRRS
QRGQVLPPQVSSEGVTLRYRGLDGVERQTQILFSPAPEVVSEKLAQWWVPLAPQEERDLEVRVVCSYGGEEIPLLSYQEA
LQAEREHRAALRALAHRIDTGNAQFNEWLNASRDDLVMMLARTPYGLYPHAGVPWFATVFGRDALITALATLWWFPDLAR
GVLLYLAAHQAQEVDPSRDAEPGKILHEQRYSEMAKTREIPFGNYFGSIDATPLFVVLAGRYVRRSGDLELLRQLWPNIE
AALSWMDTYGDPDGDGFLEYAGKARRGLRNQGWKDSEDAIFHADGSLAEPPIALCEVQGYAYEAKRLAAEMAELLGRQAQ
AAQLRQQAEKLQQRFWEQFWCEELGGYVLALDGRKQPCRVRSSNMGHCLFSGIAHPQHAERIARQLVEPAFFSGWGIRTL
AEGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGYKAEAAQVLTALFDASQFLELRRLPELFCGFRRRQREGPTLYPVACL
PQSWAAASVFLLLQACLGLEIDGLAQRVHLTQPTLPLWLPHVTLENIRVGRGSLDIGLYLQAGGVGINVLRSTGEVELTV
R

Sequences:

>Translated_721_residues
MAEDIIQIQDQYYIRASASLVEARPHVLKQDNCFAIFDRLGNMRPLGIRDHGLFRDDTRFLSRLVLDLQGKQFLLLSSEV
REDKDILAVDLTNPEFTTSKGQFIGQDTLHVLRTTFLWNNVAYERIRIHNYGSEPFRVPLTLRFEADFADMFEIRGIRRS
QRGQVLPPQVSSEGVTLRYRGLDGVERQTQILFSPAPEVVSEKLAQWWVPLAPQEERDLEVRVVCSYGGEEIPLLSYQEA
LQAEREHRAALRALAHRIDTGNAQFNEWLNASRDDLVMMLARTPYGLYPHAGVPWFATVFGRDALITALATLWWFPDLAR
GVLLYLAAHQAQEVDPSRDAEPGKILHEQRYSEMAKTREIPFGNYFGSIDATPLFVVLAGRYVRRSGDLELLRQLWPNIE
AALSWMDTYGDPDGDGFLEYAGKARRGLRNQGWKDSEDAIFHADGSLAEPPIALCEVQGYAYEAKRLAAEMAELLGRQAQ
AAQLRQQAEKLQQRFWEQFWCEELGGYVLALDGRKQPCRVRSSNMGHCLFSGIAHPQHAERIARQLVEPAFFSGWGIRTL
AEGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGYKAEAAQVLTALFDASQFLELRRLPELFCGFRRRQREGPTLYPVACL
PQSWAAASVFLLLQACLGLEIDGLAQRVHLTQPTLPLWLPHVTLENIRVGRGSLDIGLYLQAGGVGINVLRSTGEVELTV
R
>Mature_720_residues
AEDIIQIQDQYYIRASASLVEARPHVLKQDNCFAIFDRLGNMRPLGIRDHGLFRDDTRFLSRLVLDLQGKQFLLLSSEVR
EDKDILAVDLTNPEFTTSKGQFIGQDTLHVLRTTFLWNNVAYERIRIHNYGSEPFRVPLTLRFEADFADMFEIRGIRRSQ
RGQVLPPQVSSEGVTLRYRGLDGVERQTQILFSPAPEVVSEKLAQWWVPLAPQEERDLEVRVVCSYGGEEIPLLSYQEAL
QAEREHRAALRALAHRIDTGNAQFNEWLNASRDDLVMMLARTPYGLYPHAGVPWFATVFGRDALITALATLWWFPDLARG
VLLYLAAHQAQEVDPSRDAEPGKILHEQRYSEMAKTREIPFGNYFGSIDATPLFVVLAGRYVRRSGDLELLRQLWPNIEA
ALSWMDTYGDPDGDGFLEYAGKARRGLRNQGWKDSEDAIFHADGSLAEPPIALCEVQGYAYEAKRLAAEMAELLGRQAQA
AQLRQQAEKLQQRFWEQFWCEELGGYVLALDGRKQPCRVRSSNMGHCLFSGIAHPQHAERIARQLVEPAFFSGWGIRTLA
EGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGYKAEAAQVLTALFDASQFLELRRLPELFCGFRRRQREGPTLYPVACLP
QSWAAASVFLLLQACLGLEIDGLAQRVHLTQPTLPLWLPHVTLENIRVGRGSLDIGLYLQAGGVGINVLRSTGEVELTVR

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81563; Mature: 81432

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDIIQIQDQYYIRASASLVEARPHVLKQDNCFAIFDRLGNMRPLGIRDHGLFRDDTRF
CCCCHHHHCCCEEEEECHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHH
LSRLVLDLQGKQFLLLSSEVREDKDILAVDLTNPEFTTSKGQFIGQDTLHVLRTTFLWNN
HHHHHHHCCCCEEEEEEHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VAYERIRIHNYGSEPFRVPLTLRFEADFADMFEIRGIRRSQRGQVLPPQVSSEGVTLRYR
HCEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC
GLDGVERQTQILFSPAPEVVSEKLAQWWVPLAPQEERDLEVRVVCSYGGEEIPLLSYQEA
CCCCCCHHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH
LQAEREHRAALRALAHRIDTGNAQFNEWLNASRDDLVMMLARTPYGLYPHAGVPWFATVF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
GRDALITALATLWWFPDLARGVLLYLAAHQAQEVDPSRDAEPGKILHEQRYSEMAKTREI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PFGNYFGSIDATPLFVVLAGRYVRRSGDLELLRQLWPNIEAALSWMDTYGDPDGDGFLEY
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH
AGKARRGLRNQGWKDSEDAIFHADGSLAEPPIALCEVQGYAYEAKRLAAEMAELLGRQAQ
HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHH
AAQLRQQAEKLQQRFWEQFWCEELGGYVLALDGRKQPCRVRSSNMGHCLFSGIAHPQHAE
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHH
RIARQLVEPAFFSGWGIRTLAEGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGYKAEAAQ
HHHHHHHCHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCCCHHHHHH
VLTALFDASQFLELRRLPELFCGFRRRQREGPTLYPVACLPQSWAAASVFLLLQACLGLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
IDGLAQRVHLTQPTLPLWLPHVTLENIRVGRGSLDIGLYLQAGGVGINVLRSTGEVELTV
HHHHHHHEECCCCCCCEEECCEEHHHEEECCCCEEEEEEEEECCCEEEEEECCCCEEEEE
R
C
>Mature Secondary Structure 
AEDIIQIQDQYYIRASASLVEARPHVLKQDNCFAIFDRLGNMRPLGIRDHGLFRDDTRF
CCCHHHHCCCEEEEECHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHH
LSRLVLDLQGKQFLLLSSEVREDKDILAVDLTNPEFTTSKGQFIGQDTLHVLRTTFLWNN
HHHHHHHCCCCEEEEEEHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VAYERIRIHNYGSEPFRVPLTLRFEADFADMFEIRGIRRSQRGQVLPPQVSSEGVTLRYR
HCEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC
GLDGVERQTQILFSPAPEVVSEKLAQWWVPLAPQEERDLEVRVVCSYGGEEIPLLSYQEA
CCCCCCHHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH
LQAEREHRAALRALAHRIDTGNAQFNEWLNASRDDLVMMLARTPYGLYPHAGVPWFATVF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
GRDALITALATLWWFPDLARGVLLYLAAHQAQEVDPSRDAEPGKILHEQRYSEMAKTREI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PFGNYFGSIDATPLFVVLAGRYVRRSGDLELLRQLWPNIEAALSWMDTYGDPDGDGFLEY
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH
AGKARRGLRNQGWKDSEDAIFHADGSLAEPPIALCEVQGYAYEAKRLAAEMAELLGRQAQ
HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHH
AAQLRQQAEKLQQRFWEQFWCEELGGYVLALDGRKQPCRVRSSNMGHCLFSGIAHPQHAE
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHH
RIARQLVEPAFFSGWGIRTLAEGEGRYNPMSYHNGSIWPHDNALIAAGLSRYGYKAEAAQ
HHHHHHHCHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCCCHHHHHH
VLTALFDASQFLELRRLPELFCGFRRRQREGPTLYPVACLPQSWAAASVFLLLQACLGLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
IDGLAQRVHLTQPTLPLWLPHVTLENIRVGRGSLDIGLYLQAGGVGINVLRSTGEVELTV
HHHHHHHEECCCCCCCEEECCEEHHHEEECCCCEEEEEEEEECCCEEEEEECCCCEEEEE
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA