| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361275
Identifier: 86361275
GI number: 86361275
Start: 610533
End: 611819
Strand: Direct
Name: 86361275
Synonym: RHE_PF00546
Alternate gene names: NA
Gene position: 610533-611819 (Clockwise)
Preceding gene: 86361274
Following gene: 86361281
Centisome position: 95.02
GC content: 61.38
Gene sequence:
>1287_bases ATGTCGTCCACCGAACATCTCGTCACCCGCCGAACTCTTCTTGCCAGCGCCGCCGCTGCCGGCGCGTTGATCATCATGCC ACAACAAGTGGCGTTCGCCAAAGAAGGCGACGAACGTATCCGCCGCTTCAGCTTCAAGGCCAGCGAAGAGCAGCTCGGCG ATCTGCGCCGCCGCATCGAGGCAACGCGCTTTCCCGAACCTGAGCTCGTCGCCGACAGCTCGCAAGGCGTCCAGTCCGCA ACAATCGAAAAGCTGGCGAAATATTGGGCGACGAACTACGATTGGAGAAAGATCGAAGCCAAGCTCAACGAATTGCCGCA GTTCATCACGGAGATCGACGGCGTCGACATCCACTTCATCCATGTCAAAGCCAAGCATGACGGCGCCCTCCCGATCATCG TGACGCACGGATGGCCGGGCTCGATCATCGAGCAGATGAAGATCATCGGACCGCTGACGGATCCGACCGCGCATGGCGGC TCGGCATCCGACGCCTTCGACGTCGTCATCCCTTCTATTCCGGGGTACGGCTTCTCCGGCAAGCCGACCGAAAAGGGTTG GGATCCGATCCGGATCGCCCATGCGTGGATCGAGCTGATGAAACGTCTTGGCTACGCCAGATACGTGGCCCAGGGCGGCG ACTGGGGCGATGCGGTGACCGAACAAATGGCGCTGATCGCCCCGCCCGAACTCCTCGGCATCCACGTCAACATGCCGGCA ACCGTACCGGAGGACATCGCCACGGCCCTGCAGCCTGGCGGCAAGAAGCCGGCGGGATTGTCGCCGGACGAATCCCATGC CTACGATCAGCTGGCCGACTTCTACGCACACGGCCTCGGCTATGCGATCGAGATGGCGAACCGGCCCCAGACGCTCGTCG GCATTACGGATTCTCCCGTCGGCCTCGCTGCCTGGATGATCGACCACGACATCCGCAGCTATGAGCTGATCGCTCGTATC TTTGACGGGAGGACGGAAGGTCTCAGCCGAGACGATATTCTCGATAACATCACCCTCTACTGGCTCACGAACACGGCTGT TTCGTCGGCGCGGCTGTATTGGGAGAACAAGCTCGCCTTCTTCCAGCCGAAGAACGTCAAGATCCCGGTCGCCGTCAGCG TCTTCCCCGACGAAATCTACGCCGCGCCGCGAAGCTGGACCGAGAAGGCCTATGCGAACCTGATCCACTTCAACAGGCTC GACAAGGGCGGCCATTTCGCCGCCTGGGAGCAGACCCAGCTGTTCTGCGAGGAAATGCGAACGTCGTTCCGCACGGTTCG GAGCTAG
Upstream 100 bases:
>100_bases CACAAATCCAAAGGTATCGGCGACACCTTGGTGCAATAGATCCTCGCTTCGTCAAGTGTGAAGCTCTCCTGCGTCCAAAC ACCCATCACAGGAGAACGCC
Downstream 100 bases:
>100_bases AACGGCCCATCGTTTCTGAATGGAGGCCGGACTCAACCGTGGTTGAGTTCGGCCATCGCAGGAGCCGGCGGCGCGATGAT GCCTTTCAGGATCTGATGAG
Product: putative epoxide hydrolase protein
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSSTEHLVTRRTLLASAAAAGALIIMPQQVAFAKEGDERIRRFSFKASEEQLGDLRRRIEATRFPEPELVADSSQGVQSA TIEKLAKYWATNYDWRKIEAKLNELPQFITEIDGVDIHFIHVKAKHDGALPIIVTHGWPGSIIEQMKIIGPLTDPTAHGG SASDAFDVVIPSIPGYGFSGKPTEKGWDPIRIAHAWIELMKRLGYARYVAQGGDWGDAVTEQMALIAPPELLGIHVNMPA TVPEDIATALQPGGKKPAGLSPDESHAYDQLADFYAHGLGYAIEMANRPQTLVGITDSPVGLAAWMIDHDIRSYELIARI FDGRTEGLSRDDILDNITLYWLTNTAVSSARLYWENKLAFFQPKNVKIPVAVSVFPDEIYAAPRSWTEKAYANLIHFNRL DKGGHFAAWEQTQLFCEEMRTSFRTVRS
Sequences:
>Translated_428_residues MSSTEHLVTRRTLLASAAAAGALIIMPQQVAFAKEGDERIRRFSFKASEEQLGDLRRRIEATRFPEPELVADSSQGVQSA TIEKLAKYWATNYDWRKIEAKLNELPQFITEIDGVDIHFIHVKAKHDGALPIIVTHGWPGSIIEQMKIIGPLTDPTAHGG SASDAFDVVIPSIPGYGFSGKPTEKGWDPIRIAHAWIELMKRLGYARYVAQGGDWGDAVTEQMALIAPPELLGIHVNMPA TVPEDIATALQPGGKKPAGLSPDESHAYDQLADFYAHGLGYAIEMANRPQTLVGITDSPVGLAAWMIDHDIRSYELIARI FDGRTEGLSRDDILDNITLYWLTNTAVSSARLYWENKLAFFQPKNVKIPVAVSVFPDEIYAAPRSWTEKAYANLIHFNRL DKGGHFAAWEQTQLFCEEMRTSFRTVRS >Mature_427_residues SSTEHLVTRRTLLASAAAAGALIIMPQQVAFAKEGDERIRRFSFKASEEQLGDLRRRIEATRFPEPELVADSSQGVQSAT IEKLAKYWATNYDWRKIEAKLNELPQFITEIDGVDIHFIHVKAKHDGALPIIVTHGWPGSIIEQMKIIGPLTDPTAHGGS ASDAFDVVIPSIPGYGFSGKPTEKGWDPIRIAHAWIELMKRLGYARYVAQGGDWGDAVTEQMALIAPPELLGIHVNMPAT VPEDIATALQPGGKKPAGLSPDESHAYDQLADFYAHGLGYAIEMANRPQTLVGITDSPVGLAAWMIDHDIRSYELIARIF DGRTEGLSRDDILDNITLYWLTNTAVSSARLYWENKLAFFQPKNVKIPVAVSVFPDEIYAAPRSWTEKAYANLIHFNRLD KGGHFAAWEQTQLFCEEMRTSFRTVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=406, Percent_Identity=35.2216748768473, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI209862837, Length=406, Percent_Identity=35.2216748768473, Blast_Score=249, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17564944, Length=400, Percent_Identity=34, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI193207462, Length=399, Percent_Identity=27.0676691729323, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI20130139, Length=420, Percent_Identity=29.5238095238095, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI19922580, Length=395, Percent_Identity=28.6075949367089, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24655327, Length=391, Percent_Identity=28.9002557544757, Blast_Score=160, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 47584; Mature: 47452
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTEHLVTRRTLLASAAAAGALIIMPQQVAFAKEGDERIRRFSFKASEEQLGDLRRRIE CCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHH ATRFPEPELVADSSQGVQSATIEKLAKYWATNYDWRKIEAKLNELPQFITEIDGVDIHFI HHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE HVKAKHDGALPIIVTHGWPGSIIEQMKIIGPLTDPTAHGGSASDAFDVVIPSIPGYGFSG EEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC KPTEKGWDPIRIAHAWIELMKRLGYARYVAQGGDWGDAVTEQMALIAPPELLGIHVNMPA CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCHHEEEEECCCC TVPEDIATALQPGGKKPAGLSPDESHAYDQLADFYAHGLGYAIEMANRPQTLVGITDSPV CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCC GLAAWMIDHDIRSYELIARIFDGRTEGLSRDDILDNITLYWLTNTAVSSARLYWENKLAF HHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHCEEEEEEECCHHHHHEEEEECCEEE FQPKNVKIPVAVSVFPDEIYAAPRSWTEKAYANLIHFNRLDKGGHFAAWEQTQLFCEEMR ECCCCEEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHH TSFRTVRS HHHHHHCC >Mature Secondary Structure SSTEHLVTRRTLLASAAAAGALIIMPQQVAFAKEGDERIRRFSFKASEEQLGDLRRRIE CCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHH ATRFPEPELVADSSQGVQSATIEKLAKYWATNYDWRKIEAKLNELPQFITEIDGVDIHFI HHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE HVKAKHDGALPIIVTHGWPGSIIEQMKIIGPLTDPTAHGGSASDAFDVVIPSIPGYGFSG EEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC KPTEKGWDPIRIAHAWIELMKRLGYARYVAQGGDWGDAVTEQMALIAPPELLGIHVNMPA CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCHHEEEEECCCC TVPEDIATALQPGGKKPAGLSPDESHAYDQLADFYAHGLGYAIEMANRPQTLVGITDSPV CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCC GLAAWMIDHDIRSYELIARIFDGRTEGLSRDDILDNITLYWLTNTAVSSARLYWENKLAF HHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHCEEEEEEECCHHHHHEEEEECCEEE FQPKNVKIPVAVSVFPDEIYAAPRSWTEKAYANLIHFNRLDKGGHFAAWEQTQLFCEEMR ECCCCEEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHH TSFRTVRS HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]