| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361281
Identifier: 86361281
GI number: 86361281
Start: 619893
End: 620255
Strand: Direct
Name: 86361281
Synonym: RHE_PF00553
Alternate gene names: NA
Gene position: 619893-620255 (Clockwise)
Preceding gene: 86361275
Following gene: 86361288
Centisome position: 96.48
GC content: 57.58
Gene sequence:
>363_bases ATGCCATCGAGTGTTGGTTTCTGCGCAGAACTGAGCCCTTTGCGCCTAATCGGCTCAGTTCTGCGGCGAAACCAACATCG ACTCACCATCTACAGTCGATGCCTTGACGAAGATGGCAGCGCCGGGCGCGGCTTGGCTGACAATAGCTGCAGCGCTTGGA GCAGCAGCGTCATGAACATGGCGGGCAACTCTGCCTTTCGGGCGCCGCAGTGTCTATTCCGCATGACGCTCATCGCTTCA TCTGTTTTCTGCCTTGAACGTGCGGCTATGATGGTTGCTGAACGGCAGCCACCTGATGAATGCGCCTACAGCCAATTTTC GCCTGCGGCACCATTGCGGCTCTTCTCGGCCGGTGCCAAATAG
Upstream 100 bases:
>100_bases AGGTCATCCGGTACGATTTGGCTGGATGCGACACCTGAACAACCTGTGACCATCCCGCTTATCAAAAATGCGCTGGCTGC GCTGCTGCATGTGAATGTAA
Downstream 100 bases:
>100_bases TCTGATGACAGACGAACAACAGCCAGCGCCCGACGGTGTGCAGATGCAGCTTTCTCCAGAGGAAGCCCTTGTCCTCTTTG GTTTGCTCTCGCGGTGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPSSVGFCAELSPLRLIGSVLRRNQHRLTIYSRCLDEDGSAGRGLADNSCSAWSSSVMNMAGNSAFRAPQCLFRMTLIAS SVFCLERAAMMVAERQPPDECAYSQFSPAAPLRLFSAGAK
Sequences:
>Translated_120_residues MPSSVGFCAELSPLRLIGSVLRRNQHRLTIYSRCLDEDGSAGRGLADNSCSAWSSSVMNMAGNSAFRAPQCLFRMTLIAS SVFCLERAAMMVAERQPPDECAYSQFSPAAPLRLFSAGAK >Mature_119_residues PSSVGFCAELSPLRLIGSVLRRNQHRLTIYSRCLDEDGSAGRGLADNSCSAWSSSVMNMAGNSAFRAPQCLFRMTLIASS VFCLERAAMMVAERQPPDECAYSQFSPAAPLRLFSAGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12970; Mature: 12839
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSVGFCAELSPLRLIGSVLRRNQHRLTIYSRCLDEDGSAGRGLADNSCSAWSSSVMNM CCCCCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AGNSAFRAPQCLFRMTLIASSVFCLERAAMMVAERQPPDECAYSQFSPAAPLRLFSAGAK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHCCCCC >Mature Secondary Structure PSSVGFCAELSPLRLIGSVLRRNQHRLTIYSRCLDEDGSAGRGLADNSCSAWSSSVMNM CCCCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AGNSAFRAPQCLFRMTLIASSVFCLERAAMMVAERQPPDECAYSQFSPAAPLRLFSAGAK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA