| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is 86361274
Identifier: 86361274
GI number: 86361274
Start: 609618
End: 610286
Strand: Direct
Name: 86361274
Synonym: RHE_PF00545
Alternate gene names: NA
Gene position: 609618-610286 (Clockwise)
Preceding gene: 86361273
Following gene: 86361275
Centisome position: 94.88
GC content: 62.48
Gene sequence:
>669_bases ATGACTGTTCATGAATCGATGAATTCGAAAGCAGCCGCCTTGACCGAGATCGATATGAAGCTCGAAGTCGTGGTCATTCC CGTATCGGACGTCGACCGCGCCAAGGCATTTTACACCGGCCTCGGCTGGCGGCTCGATGCAGACTTTCCAGGCAAGGACG GGTTCCGTGTCGTGCAGGTGACGCCGCCTGGATCGCCATGCTCGGTCATCTTCGGATCGAAGGTCACCTCGGCTTTGCCT GGCTCGGCACAAGGGCTTCACCTCATCGTCTCCGATATCGAAACGGCGAATGCCGCGCTGGCCGCGAGGGGTGCCGAGAT GAGCGGCGTCTTCCACGATGCCGGCGGCGTGTTCCACCATCGGGGCACTGAACAAAGGCTGGCTGGTCCACATCCGTCCC GCGCCAGCTATGGCTCCTTCGCCTCATTCACCGATCCGGACGGGAACGGCTGGCTCTTCCAGGAAGTCACAACGCGGCTG CCCGGACGGATCGATGAGAAAGGCGCGACCTTCACCTCCACGCCCGATCTTGCCGGCGCCCTCCGTCGTGCGGCCGCCGC CCATGGCGAACATGAAAAGCGGACCGGTGGCAAACACGACGAAAACTGGCCGGACTGGTATGCGGAATACATGCTCGCCG AGCAGTCCGGGGCAGCACTGGAGACCTGA
Upstream 100 bases:
>100_bases CTGACCAACACCTATGCATAATGGACAGCCGTCTGGTCGGGGCGCATCGTCTCTCCGTTGCGGCAAGAGCCGCAGGAGAG TTCACCTTAGGGAGATCGAA
Downstream 100 bases:
>100_bases CGGCTCACGCCGCCGATCAACCTCAAGCTCGGCATATGGGGCGGCCGCGGGCCGCCCTTGCTTTATCAACGGGACCGACC TCTTGGCATGCGCGCATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase; Lyase Glyoxalase Family Protein; Glyoxalase Protein; Lactoylglutathione Lyase Family Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTVHESMNSKAAALTEIDMKLEVVVIPVSDVDRAKAFYTGLGWRLDADFPGKDGFRVVQVTPPGSPCSVIFGSKVTSALP GSAQGLHLIVSDIETANAALAARGAEMSGVFHDAGGVFHHRGTEQRLAGPHPSRASYGSFASFTDPDGNGWLFQEVTTRL PGRIDEKGATFTSTPDLAGALRRAAAAHGEHEKRTGGKHDENWPDWYAEYMLAEQSGAALET
Sequences:
>Translated_222_residues MTVHESMNSKAAALTEIDMKLEVVVIPVSDVDRAKAFYTGLGWRLDADFPGKDGFRVVQVTPPGSPCSVIFGSKVTSALP GSAQGLHLIVSDIETANAALAARGAEMSGVFHDAGGVFHHRGTEQRLAGPHPSRASYGSFASFTDPDGNGWLFQEVTTRL PGRIDEKGATFTSTPDLAGALRRAAAAHGEHEKRTGGKHDENWPDWYAEYMLAEQSGAALET >Mature_221_residues TVHESMNSKAAALTEIDMKLEVVVIPVSDVDRAKAFYTGLGWRLDADFPGKDGFRVVQVTPPGSPCSVIFGSKVTSALPG SAQGLHLIVSDIETANAALAARGAEMSGVFHDAGGVFHHRGTEQRLAGPHPSRASYGSFASFTDPDGNGWLFQEVTTRLP GRIDEKGATFTSTPDLAGALRRAAAAHGEHEKRTGGKHDENWPDWYAEYMLAEQSGAALET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23666; Mature: 23534
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVHESMNSKAAALTEIDMKLEVVVIPVSDVDRAKAFYTGLGWRLDADFPGKDGFRVVQV CCCCCCCCCCHHEEEEECEEEEEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEE TPPGSPCSVIFGSKVTSALPGSAQGLHLIVSDIETANAALAARGAEMSGVFHDAGGVFHH CCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEECCCCEEEC RGTEQRLAGPHPSRASYGSFASFTDPDGNGWLFQEVTTRLPGRIDEKGATFTSTPDLAGA CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCEECCCCHHHHH LRRAAAAHGEHEKRTGGKHDENWPDWYAEYMLAEQSGAALET HHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TVHESMNSKAAALTEIDMKLEVVVIPVSDVDRAKAFYTGLGWRLDADFPGKDGFRVVQV CCCCCCCCCHHEEEEECEEEEEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEE TPPGSPCSVIFGSKVTSALPGSAQGLHLIVSDIETANAALAARGAEMSGVFHDAGGVFHH CCCCCCEEEEECCHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEECCCCEEEC RGTEQRLAGPHPSRASYGSFASFTDPDGNGWLFQEVTTRLPGRIDEKGATFTSTPDLAGA CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCEECCCCHHHHH LRRAAAAHGEHEKRTGGKHDENWPDWYAEYMLAEQSGAALET HHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA