Click here to switch to the map view.

The map label for this gene is 86361270

Identifier: 86361270

GI number: 86361270

Start: 606687

End: 607157

Strand: Direct

Name: 86361270

Synonym: RHE_PF00541

Alternate gene names: NA

Gene position: 606687-607157 (Clockwise)

Preceding gene: 86361269

Following gene: 86361271

Centisome position: 94.42

GC content: 65.61

Gene sequence:

>471_bases
ATGGTGACGCCGAGCGCAGAAGCGCGGCTGCGGGAACTCGCGCTGGACCTGCCCCCTCCGCCGACGCCCTTCGGCGCCTA
CGTCGAAGCGGTTCAAGCCGGCCCGCTGCTGTTCCTGAGCGGCATGCTCCCCGTGGTGGGACACGTGCCGAAATATCTAG
GGCGGCTTGGTGAGGACCTCTCTATTGAAGAGGGCTACGACGCCGCGAGAACGGCGTGCCTCGGCGGATTGTCGGCCGCC
AGAGCGCATCTCGGATCTCTCGACAGGATCAGGACGATCGCCAAGCTCGGCGTCTACATCGCAGCCACCAGCGATTTCCG
GGACCACCCCAAGGTCGCCGATGGCGCCTCCGAGCTGCTTTCCCGGATCTTCGGCGAAACACGGGTTCCACCCCGCATCG
TACTCGGCGTTTCGAGCGTGCCGCTCGGAATGCCCATCGAGGTCGAGCTCGTCCTCGAGATCGAAACCTAG

Upstream 100 bases:

>100_bases
CCGCGGTCCAGGAAATCGTCGACGGTGTGGTTTATCTCGCGGAATCGTCTAATATCACCGGGGAGGTGCTGCACGTCGAC
AACGGCGCACATCTCGGCAA

Downstream 100 bases:

>100_bases
CGAACTCTTCGCTCAATTTCCTTGGAGCCAGTCATGAACGTGAGAATGCAGAAATCGACCACATTCGCCACCTTGTCATC
GCAGTTTCTCGCCGCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-Psp; Endoribonuclease L-PSP Family Protein; Endoribonuclease; Translation Initiation Inhibitor Protein; Transcriptional Regulator; Translation Initiation Inhibitor YjgF Family; Transcription Regulator; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MVTPSAEARLRELALDLPPPPTPFGAYVEAVQAGPLLFLSGMLPVVGHVPKYLGRLGEDLSIEEGYDAARTACLGGLSAA
RAHLGSLDRIRTIAKLGVYIAATSDFRDHPKVADGASELLSRIFGETRVPPRIVLGVSSVPLGMPIEVELVLEIET

Sequences:

>Translated_156_residues
MVTPSAEARLRELALDLPPPPTPFGAYVEAVQAGPLLFLSGMLPVVGHVPKYLGRLGEDLSIEEGYDAARTACLGGLSAA
RAHLGSLDRIRTIAKLGVYIAATSDFRDHPKVADGASELLSRIFGETRVPPRIVLGVSSVPLGMPIEVELVLEIET
>Mature_156_residues
MVTPSAEARLRELALDLPPPPTPFGAYVEAVQAGPLLFLSGMLPVVGHVPKYLGRLGEDLSIEEGYDAARTACLGGLSAA
RAHLGSLDRIRTIAKLGVYIAATSDFRDHPKVADGASELLSRIFGETRVPPRIVLGVSSVPLGMPIEVELVLEIET

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16538; Mature: 16538

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPSAEARLRELALDLPPPPTPFGAYVEAVQAGPLLFLSGMLPVVGHVPKYLGRLGEDL
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SIEEGYDAARTACLGGLSAARAHLGSLDRIRTIAKLGVYIAATSDFRDHPKVADGASELL
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHH
SRIFGETRVPPRIVLGVSSVPLGMPIEVELVLEIET
HHHHCCCCCCCEEEEECCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MVTPSAEARLRELALDLPPPPTPFGAYVEAVQAGPLLFLSGMLPVVGHVPKYLGRLGEDL
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SIEEGYDAARTACLGGLSAARAHLGSLDRIRTIAKLGVYIAATSDFRDHPKVADGASELL
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHH
SRIFGETRVPPRIVLGVSSVPLGMPIEVELVLEIET
HHHHCCCCCCCEEEEECCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA