| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361251
Identifier: 86361251
GI number: 86361251
Start: 588168
End: 588698
Strand: Direct
Name: 86361251
Synonym: RHE_PF00522
Alternate gene names: NA
Gene position: 588168-588698 (Clockwise)
Preceding gene: 86361250
Following gene: 86361252
Centisome position: 91.54
GC content: 61.02
Gene sequence:
>531_bases ATGGTTCAGCTCCGCGAACTCGACGTAAGAAACATCCTGCGCGACGGCGGCATGCCGTTTCAGCTCATCATGGATACCTT CGCCAGTCTCGACCCCGATGAGGGCGTGCGGCTTCACGCCATATTCGAACCCGTCCCGCTGATCCGCCAGCTGGAGCAGC GCGGCTATTCGCATCTCAGCAAGCGCCTTGCCGATGACGACTGGGAAATCGATTTCGTCCCTCGTGAGAAGCCCGGCAGC GAACCGGTCACGGCAACCGCAGCGGCGGAGGCGATCTGGCCGGAGCCGAGCTGGAACCTCGATCTGACCGATCTCGCGCC GCCGGAGCCGATGGAACGCATCCTTTCGCGGCTGGAATCGATGAAAAGCGGTGAGGTGCTGTTTGCGCTGCTGAACCGCG AGCCGCTGTTTCTGTTCAATGAGCTGAAGGTGCGCGGCCATGAATGGATCGGGGATTTCGACGCCAGCGGCAAGATCTAC AGGATCATGATCAGAGCAACGCCCGCGAATGGTTCCGATGCCCGCACATAA
Upstream 100 bases:
>100_bases TCCTGGCACGCCGCCTGGCGAATGTCGCTCCCGTCACAAGGGGAGCACCTTTTCAACAGCCGGCGCTTTTCGTCGCCGCC AAACCACAGAGGTAATGCCA
Downstream 100 bases:
>100_bases GATCTCCAGATCGGCAATCCTGTCGGCTTTACGCGGCATCGAGGATCCGGAGCTCGGAACTGATATTGTCGAGCTGGGAC TGATCTACGCCATCGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MVQLRELDVRNILRDGGMPFQLIMDTFASLDPDEGVRLHAIFEPVPLIRQLEQRGYSHLSKRLADDDWEIDFVPREKPGS EPVTATAAAEAIWPEPSWNLDLTDLAPPEPMERILSRLESMKSGEVLFALLNREPLFLFNELKVRGHEWIGDFDASGKIY RIMIRATPANGSDART
Sequences:
>Translated_176_residues MVQLRELDVRNILRDGGMPFQLIMDTFASLDPDEGVRLHAIFEPVPLIRQLEQRGYSHLSKRLADDDWEIDFVPREKPGS EPVTATAAAEAIWPEPSWNLDLTDLAPPEPMERILSRLESMKSGEVLFALLNREPLFLFNELKVRGHEWIGDFDASGKIY RIMIRATPANGSDART >Mature_176_residues MVQLRELDVRNILRDGGMPFQLIMDTFASLDPDEGVRLHAIFEPVPLIRQLEQRGYSHLSKRLADDDWEIDFVPREKPGS EPVTATAAAEAIWPEPSWNLDLTDLAPPEPMERILSRLESMKSGEVLFALLNREPLFLFNELKVRGHEWIGDFDASGKIY RIMIRATPANGSDART
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20026; Mature: 20026
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQLRELDVRNILRDGGMPFQLIMDTFASLDPDEGVRLHAIFEPVPLIRQLEQRGYSHLS CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH KRLADDDWEIDFVPREKPGSEPVTATAAAEAIWPEPSWNLDLTDLAPPEPMERILSRLES HHHCCCCCEEEEEECCCCCCCCEEHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHC MKSGEVLFALLNREPLFLFNELKVRGHEWIGDFDASGKIYRIMIRATPANGSDART CCCCCEEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure MVQLRELDVRNILRDGGMPFQLIMDTFASLDPDEGVRLHAIFEPVPLIRQLEQRGYSHLS CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH KRLADDDWEIDFVPREKPGSEPVTATAAAEAIWPEPSWNLDLTDLAPPEPMERILSRLES HHHCCCCCEEEEEECCCCCCCCEEHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHC MKSGEVLFALLNREPLFLFNELKVRGHEWIGDFDASGKIYRIMIRATPANGSDART CCCCCEEEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA