| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is yitW [H]
Identifier: 86361252
GI number: 86361252
Start: 588685
End: 588984
Strand: Direct
Name: yitW [H]
Synonym: RHE_PF00523
Alternate gene names: 86361252
Gene position: 588685-588984 (Clockwise)
Preceding gene: 86361251
Following gene: 86361254
Centisome position: 91.62
GC content: 60.33
Gene sequence:
>300_bases ATGCCCGCACATAAGATCTCCAGATCGGCAATCCTGTCGGCTTTACGCGGCATCGAGGATCCGGAGCTCGGAACTGATAT TGTCGAGCTGGGACTGATCTACGCCATCGGGATTTTGGAGGACGGCGCCGTCAGAATAAAAATGACGACGACGACCCGCT TCTGTCCGGCTTCCGCCTTCATCGCCGAAGCGGTGAAGGCGCGGACCGAGGCGATCGACGGCGTTTCGGCAACCGTCGTC GAGATGGTCTACGATCCGGCCTGGTCGCCGGAGATGATGGGACGCCTGCCGAGGGAATAG
Upstream 100 bases:
>100_bases AATGAGCTGAAGGTGCGCGGCCATGAATGGATCGGGGATTTCGACGCCAGCGGCAAGATCTACAGGATCATGATCAGAGC AACGCCCGCGAATGGTTCCG
Downstream 100 bases:
>100_bases ATGCGGAGGCCGCCACGTTTTTAAGCGCGGCGGCATTCGCCCTCATGACTTTCTCGCGACGAGAGGTTTCCGGTCGCGGC ACAGCGCCGGGGCATGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MPAHKISRSAILSALRGIEDPELGTDIVELGLIYAIGILEDGAVRIKMTTTTRFCPASAFIAEAVKARTEAIDGVSATVV EMVYDPAWSPEMMGRLPRE
Sequences:
>Translated_99_residues MPAHKISRSAILSALRGIEDPELGTDIVELGLIYAIGILEDGAVRIKMTTTTRFCPASAFIAEAVKARTEAIDGVSATVV EMVYDPAWSPEMMGRLPRE >Mature_98_residues PAHKISRSAILSALRGIEDPELGTDIVELGLIYAIGILEDGAVRIKMTTTTRFCPASAFIAEAVKARTEAIDGVSATVVE MVYDPAWSPEMMGRLPRE
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 10691; Mature: 10559
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAHKISRSAILSALRGIEDPELGTDIVELGLIYAIGILEDGAVRIKMTTTTRFCPASAF CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHH IAEAVKARTEAIDGVSATVVEMVYDPAWSPEMMGRLPRE HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCC >Mature Secondary Structure PAHKISRSAILSALRGIEDPELGTDIVELGLIYAIGILEDGAVRIKMTTTTRFCPASAF CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHH IAEAVKARTEAIDGVSATVVEMVYDPAWSPEMMGRLPRE HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]