| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361250
Identifier: 86361250
GI number: 86361250
Start: 586813
End: 588162
Strand: Direct
Name: 86361250
Synonym: RHE_PF00521
Alternate gene names: NA
Gene position: 586813-588162 (Clockwise)
Preceding gene: 86361249
Following gene: 86361251
Centisome position: 91.33
GC content: 64.96
Gene sequence:
>1350_bases ATGCCTGTCGGCACAACCCTGTCGCGTTGGACGATGGCCTATTTCGGCGCGGCGCTCTTCTTCCTGCTTCTGGCGGAAAG CCTGCTTTCGGCAGGGCTCTGGGCGCCGTCCTCGGCTGTCGCCGAACCCCATGCGCTCATCATCGTGCATTCGATGACGA TCGGCTGGCTCGGCCTGCTGATGATTGGCGCGCTGCTGCAGTTCACGCCGGTGCTGACGGGCCTCGGCCTGCCGACCGGC CGGCTCGATCTGCCCTGTCTTGCCGGCACGGTCGCCGGGCTCGGGCTTCTCCTCTGCGGCTTCCAGCTGATCGACGTGGG ATCGGCCGCGGCCGGCCCTGTCATGGTCGCGGCATCGGCGGTCCTGCTGGCCTCGCTCCTGTCGATTGCATCGGTGCTGT TATCAGGCCTCTGGCGCGGTCGGGCGGCCCATGCCGCCTCGCCGCTCGTCATGCTCGCTATCGCATGCCTTGCGGTGACG GTCGTGCTGGGATCGCTGTTTGCGGTCACGGTTTCCGGCGTAACCGCAACCCCCGGCATCAGCGCGTTTGTCGTGAATGC CCTGCCCTTCCACGCGAGCTTCGGCCTCGCCGGATGGATGACCTTTGCCGCGATCGGCGTCAGCTACAAGCTGCTGCCGA TGTTTCTGCTTTCCCAAGAGATGCAGAAATCACCATTCATCCGCGGCACGGGAGCGTTCGCGGCGATCACGCTTGGCGTT GCGACGGTCTCGACGATCTTCGAACCCTCGCTCGGTCAGCGCGTCTTTCTGATTGGATCGCTGTTCTTCCAGCTGCCGAT CGCGGCCTATCTGGCTGAGCTGTTCCTGACATATCGGGCAAGACGCCGAAAAGCTCTCGAACTGAACATGTCGGGATCCC TGCCCGCTTTCGTCCTGCTGGGCCTTTCCGTTCCGATGTTCGCGGTAGCCCTTGTCGGCGACGCCGCCCCGCAGATTTTT GCCGCGATAGCCTATCTGTTCGTCTTCGGCTGGCTGACGGGCCTCGGTCTGTCCCAGCTCCTGAAGATCGTTCCTTTCCT GACCTGGATCGAGGCCTTCGGGCCCCTCCTCGGGCGCGGCCCCACGCCGCGGCTGGCCGACCTCCTCAATGGGCGACGGG CTGCCGCCTGGCTCTCTATCTTCTACCTCGCCGTCGTCGCATCAGCGGCGGCGATCGCGGCCGGATCCGATGCCGGTTTC CGTCTTGCCGTCACGGTACAGACATTGGCTACCGCTGCCCTCGCCATCGAGCTCGTCCTGGCACGCCGCCTGGCGAATGT CGCTCCCGTCACAAGGGGAGCACCTTTTCAACAGCCGGCGCTTTTCGTCGCCGCCAAACCACAGAGGTAA
Upstream 100 bases:
>100_bases TCTGGAGCAAGGCCCTGATATCTGGCGGGTGCAGATCACCCGGCAGGATGCCGGCTGCGACTGCTGCTGCGGTAGCCACT AAGTTCGGATCGGCGCGATG
Downstream 100 bases:
>100_bases TGCCAATGGTTCAGCTCCGCGAACTCGACGTAAGAAACATCCTGCGCGACGGCGGCATGCCGTTTCAGCTCATCATGGAT ACCTTCGCCAGTCTCGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MPVGTTLSRWTMAYFGAALFFLLLAESLLSAGLWAPSSAVAEPHALIIVHSMTIGWLGLLMIGALLQFTPVLTGLGLPTG RLDLPCLAGTVAGLGLLLCGFQLIDVGSAAAGPVMVAASAVLLASLLSIASVLLSGLWRGRAAHAASPLVMLAIACLAVT VVLGSLFAVTVSGVTATPGISAFVVNALPFHASFGLAGWMTFAAIGVSYKLLPMFLLSQEMQKSPFIRGTGAFAAITLGV ATVSTIFEPSLGQRVFLIGSLFFQLPIAAYLAELFLTYRARRRKALELNMSGSLPAFVLLGLSVPMFAVALVGDAAPQIF AAIAYLFVFGWLTGLGLSQLLKIVPFLTWIEAFGPLLGRGPTPRLADLLNGRRAAAWLSIFYLAVVASAAAIAAGSDAGF RLAVTVQTLATAALAIELVLARRLANVAPVTRGAPFQQPALFVAAKPQR
Sequences:
>Translated_449_residues MPVGTTLSRWTMAYFGAALFFLLLAESLLSAGLWAPSSAVAEPHALIIVHSMTIGWLGLLMIGALLQFTPVLTGLGLPTG RLDLPCLAGTVAGLGLLLCGFQLIDVGSAAAGPVMVAASAVLLASLLSIASVLLSGLWRGRAAHAASPLVMLAIACLAVT VVLGSLFAVTVSGVTATPGISAFVVNALPFHASFGLAGWMTFAAIGVSYKLLPMFLLSQEMQKSPFIRGTGAFAAITLGV ATVSTIFEPSLGQRVFLIGSLFFQLPIAAYLAELFLTYRARRRKALELNMSGSLPAFVLLGLSVPMFAVALVGDAAPQIF AAIAYLFVFGWLTGLGLSQLLKIVPFLTWIEAFGPLLGRGPTPRLADLLNGRRAAAWLSIFYLAVVASAAAIAAGSDAGF RLAVTVQTLATAALAIELVLARRLANVAPVTRGAPFQQPALFVAAKPQR >Mature_448_residues PVGTTLSRWTMAYFGAALFFLLLAESLLSAGLWAPSSAVAEPHALIIVHSMTIGWLGLLMIGALLQFTPVLTGLGLPTGR LDLPCLAGTVAGLGLLLCGFQLIDVGSAAAGPVMVAASAVLLASLLSIASVLLSGLWRGRAAHAASPLVMLAIACLAVTV VLGSLFAVTVSGVTATPGISAFVVNALPFHASFGLAGWMTFAAIGVSYKLLPMFLLSQEMQKSPFIRGTGAFAAITLGVA TVSTIFEPSLGQRVFLIGSLFFQLPIAAYLAELFLTYRARRRKALELNMSGSLPAFVLLGLSVPMFAVALVGDAAPQIFA AIAYLFVFGWLTGLGLSQLLKIVPFLTWIEAFGPLLGRGPTPRLADLLNGRRAAAWLSIFYLAVVASAAAIAAGSDAGFR LAVTVQTLATAALAIELVLARRLANVAPVTRGAPFQQPALFVAAKPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46631; Mature: 46500
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVGTTLSRWTMAYFGAALFFLLLAESLLSAGLWAPSSAVAEPHALIIVHSMTIGWLGLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH MIGALLQFTPVLTGLGLPTGRLDLPCLAGTVAGLGLLLCGFQLIDVGSAAAGPVMVAASA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VLLASLLSIASVLLSGLWRGRAAHAASPLVMLAIACLAVTVVLGSLFAVTVSGVTATPGI HHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SAFVVNALPFHASFGLAGWMTFAAIGVSYKLLPMFLLSQEMQKSPFIRGTGAFAAITLGV HHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ATVSTIFEPSLGQRVFLIGSLFFQLPIAAYLAELFLTYRARRRKALELNMSGSLPAFVLL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH GLSVPMFAVALVGDAAPQIFAAIAYLFVFGWLTGLGLSQLLKIVPFLTWIEAFGPLLGRG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC PTPRLADLLNGRRAAAWLSIFYLAVVASAAAIAAGSDAGFRLAVTVQTLATAALAIELVL CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH ARRLANVAPVTRGAPFQQPALFVAAKPQR HHHHHHHCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure PVGTTLSRWTMAYFGAALFFLLLAESLLSAGLWAPSSAVAEPHALIIVHSMTIGWLGLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH MIGALLQFTPVLTGLGLPTGRLDLPCLAGTVAGLGLLLCGFQLIDVGSAAAGPVMVAASA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VLLASLLSIASVLLSGLWRGRAAHAASPLVMLAIACLAVTVVLGSLFAVTVSGVTATPGI HHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SAFVVNALPFHASFGLAGWMTFAAIGVSYKLLPMFLLSQEMQKSPFIRGTGAFAAITLGV HHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ATVSTIFEPSLGQRVFLIGSLFFQLPIAAYLAELFLTYRARRRKALELNMSGSLPAFVLL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH GLSVPMFAVALVGDAAPQIFAAIAYLFVFGWLTGLGLSQLLKIVPFLTWIEAFGPLLGRG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC PTPRLADLLNGRRAAAWLSIFYLAVVASAAAIAAGSDAGFRLAVTVQTLATAALAIELVL CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH ARRLANVAPVTRGAPFQQPALFVAAKPQR HHHHHHHCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA