| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is vbsC
Identifier: 86361193
GI number: 86361193
Start: 522588
End: 523079
Strand: Direct
Name: vbsC
Synonym: RHE_PF00463
Alternate gene names: NA
Gene position: 522588-523079 (Clockwise)
Preceding gene: 86361191
Following gene: 86361194
Centisome position: 81.33
GC content: 63.82
Gene sequence:
>492_bases ATGAGACGAACAGTCGAGATTCTGACCGGCAAGGCGGAGCTCTGCCGATCGATCATGGGGGCTTTGCCCGACTGGTTTTC GGAACCCGAGGTCATCGAGGCAAGCGCCCGGGCGGTCGAGGAACTGCCGGTGTTCGGATATATCGAGGCGGATGTCGTCA CCGCCATGATCGCCCTGAAGCCGCACCTGCCTGATGCCGTCGAGATCGCGCTCATTGCGACCCGGCCCGAATATCACGGC CGCGGCGCCGGACGCCATCTCGTCGATGCGGCCGAACGATTCGCCCATGAATCGGGCGCCCGGCTGCTGACGGTCAAGAC GCTGGCGCCGCGCGGCCGCGACGAGCCGCAATTCGAGGCGACGCGGCGCTTCTATGACCGGACCGGCTTCATCAGGGCCG AAGTCTTTGCAAAACTCTGGCATGAGGATCATCCGTGCCTGTTCATGGTCAAACCGCTCATGGAGACGCAGCTGAGCAGG ACCGCGCTTTGA
Upstream 100 bases:
>100_bases CATTCCTTTATCGAAGGAAGCTACACGATGTGATTGCAGTGTCTATTTTAAGGTGATAACAGGAGTCAAGTTTAAATCGA CCGAGTGAAGGCGAGAAAAA
Downstream 100 bases:
>100_bases GACGACGAGACTTTCTTCTTGGCGCGTTGGCAATGACCGGCGGCCCCGCCATCGCACGCGCTGGCGATGCCAACGTCGTT TCACTCGATTACGGACTGGC
Product: vicibactin acetylase protein
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; GCN5-Related N-Acetyltransferase; GNAT Family Acetyltransferase; Vicibactin Acetylase Protein; Acetylase; GNAT Family Transporter Acetyltransferase
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRRTVEILTGKAELCRSIMGALPDWFSEPEVIEASARAVEELPVFGYIEADVVTAMIALKPHLPDAVEIALIATRPEYHG RGAGRHLVDAAERFAHESGARLLTVKTLAPRGRDEPQFEATRRFYDRTGFIRAEVFAKLWHEDHPCLFMVKPLMETQLSR TAL
Sequences:
>Translated_163_residues MRRTVEILTGKAELCRSIMGALPDWFSEPEVIEASARAVEELPVFGYIEADVVTAMIALKPHLPDAVEIALIATRPEYHG RGAGRHLVDAAERFAHESGARLLTVKTLAPRGRDEPQFEATRRFYDRTGFIRAEVFAKLWHEDHPCLFMVKPLMETQLSR TAL >Mature_163_residues MRRTVEILTGKAELCRSIMGALPDWFSEPEVIEASARAVEELPVFGYIEADVVTAMIALKPHLPDAVEIALIATRPEYHG RGAGRHLVDAAERFAHESGARLLTVKTLAPRGRDEPQFEATRRFYDRTGFIRAEVFAKLWHEDHPCLFMVKPLMETQLSR TAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18369; Mature: 18369
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTVEILTGKAELCRSIMGALPDWFSEPEVIEASARAVEELPVFGYIEADVVTAMIALK CCCHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHC PHLPDAVEIALIATRPEYHGRGAGRHLVDAAERFAHESGARLLTVKTLAPRGRDEPQFEA CCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHH TRRFYDRTGFIRAEVFAKLWHEDHPCLFMVKPLMETQLSRTAL HHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MRRTVEILTGKAELCRSIMGALPDWFSEPEVIEASARAVEELPVFGYIEADVVTAMIALK CCCHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHC PHLPDAVEIALIATRPEYHGRGAGRHLVDAAERFAHESGARLLTVKTLAPRGRDEPQFEA CCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHH TRRFYDRTGFIRAEVFAKLWHEDHPCLFMVKPLMETQLSRTAL HHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA