| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is fhuD
Identifier: 86361194
GI number: 86361194
Start: 523112
End: 523942
Strand: Direct
Name: fhuD
Synonym: RHE_PF00464
Alternate gene names: 86361194
Gene position: 523112-523942 (Clockwise)
Preceding gene: 86361193
Following gene: 86361195
Centisome position: 81.42
GC content: 63.06
Gene sequence:
>831_bases ATGACCGGCGGCCCCGCCATCGCACGCGCTGGCGATGCCAACGTCGTTTCACTCGATTACGGACTGGCATCGACGATGCT GGCGCTCGGCAGCGTGCCGCGCGCAATCGCTTCCCTCAGGAACTGGTCGGAATGGGTGGTCGAGCCGGCGATGCCCTCAG GCGTCGTCGATATCGGCACCACAGCCGAGATCAATCTCGAAGTCCTTACAAGCCTCAGGCCATCGCTCATCCTCACTACG CCTTTCCTTGCGGCGCTGGACGAAAAACTATCCCGGATCGCGCCAGTGGAAATCTTCACCGTCTATGCCGAGAATGGCGA AGCGCTCGACCGCTCCTACGCCGAAACACTGCGTCTCGGCGCCATGATCGGGCGGCAGAGGGAAGCGGAGGCATATCTCG CCCGCGCCGACGCCACCTTCGGCCGGCTGCGCGACCGAATGAAAGGCCTGTCCACGCGCCCGGTCGCCGTCATCAACTTC ATCGACCAGAGGCATGCGCGCATCTATGGCGGCCCCGGACTTTACGGCGGCGCGATGCGCCGGATCGGCATCGAGAACGC CTGGAAAGGCGAGGCGAGCTACTGGGGATTTCAGACGATCGGCCTAGAACAGCTCGCCGAACTCGATGAAGAGGCGCATC TTGTTGTCGTTTCGCCACTGCTTCCGCCCGATGTCCTGACCCGGCTTTCCGAAAGCCCGCTCTGGACCAGCCTTCCCTTC GTCCGGCGGCAGCGGATCTCGGTCGTTCCAGGCGTGCTGATGTTTGGAATGGTCCAGGAAGCCCTGCGCTTTTCGACTTT GATGGTCGGCGTTCTGGAGACTGCTGCCTGA
Upstream 100 bases:
>100_bases AGGATCATCCGTGCCTGTTCATGGTCAAACCGCTCATGGAGACGCAGCTGAGCAGGACCGCGCTTTGAGACGACGAGACT TTCTTCTTGGCGCGTTGGCA
Downstream 100 bases:
>100_bases TGAAAGCGCAAATTTCCGGCTTTGGCGCGCCCGCCCTCGCGGCGCTGCTGCTGTTTTCCGGCCTCGGCCTGGCTCTCCTC GACCTGCTGCCGGCGTTGCC
Product: ferrichrome-iron ABC transporter, substrate-binding protein
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein D; Ferrichrome-binding periplasmic protein; Iron(III)-hydroxamate-binding protein fhuD [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTGGPAIARAGDANVVSLDYGLASTMLALGSVPRAIASLRNWSEWVVEPAMPSGVVDIGTTAEINLEVLTSLRPSLILTT PFLAALDEKLSRIAPVEIFTVYAENGEALDRSYAETLRLGAMIGRQREAEAYLARADATFGRLRDRMKGLSTRPVAVINF IDQRHARIYGGPGLYGGAMRRIGIENAWKGEASYWGFQTIGLEQLAELDEEAHLVVVSPLLPPDVLTRLSESPLWTSLPF VRRQRISVVPGVLMFGMVQEALRFSTLMVGVLETAA
Sequences:
>Translated_276_residues MTGGPAIARAGDANVVSLDYGLASTMLALGSVPRAIASLRNWSEWVVEPAMPSGVVDIGTTAEINLEVLTSLRPSLILTT PFLAALDEKLSRIAPVEIFTVYAENGEALDRSYAETLRLGAMIGRQREAEAYLARADATFGRLRDRMKGLSTRPVAVINF IDQRHARIYGGPGLYGGAMRRIGIENAWKGEASYWGFQTIGLEQLAELDEEAHLVVVSPLLPPDVLTRLSESPLWTSLPF VRRQRISVVPGVLMFGMVQEALRFSTLMVGVLETAA >Mature_275_residues TGGPAIARAGDANVVSLDYGLASTMLALGSVPRAIASLRNWSEWVVEPAMPSGVVDIGTTAEINLEVLTSLRPSLILTTP FLAALDEKLSRIAPVEIFTVYAENGEALDRSYAETLRLGAMIGRQREAEAYLARADATFGRLRDRMKGLSTRPVAVINFI DQRHARIYGGPGLYGGAMRRIGIENAWKGEASYWGFQTIGLEQLAELDEEAHLVVVSPLLPPDVLTRLSESPLWTSLPFV RRQRISVVPGVLMFGMVQEALRFSTLMVGVLETAA
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Binds the iron(3+)-hydroxamate complex and transfers it to the membrane-bound permease. Required for the transport of all iron(3+)-hydroxamate siderophores such as ferrich
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786346, Length=271, Percent_Identity=30.9963099630996, Blast_Score=134, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008091 - InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 29998; Mature: 29867
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGPAIARAGDANVVSLDYGLASTMLALGSVPRAIASLRNWSEWVVEPAMPSGVVDIGT CCCCCCCEECCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCHHHHHCCCCCCCCCEECCC TAEINLEVLTSLRPSLILTTPFLAALDEKLSRIAPVEIFTVYAENGEALDRSYAETLRLG CCEEHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH AMIGRQREAEAYLARADATFGRLRDRMKGLSTRPVAVINFIDQRHARIYGGPGLYGGAMR HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCHHHHHH RIGIENAWKGEASYWGFQTIGLEQLAELDEEAHLVVVSPLLPPDVLTRLSESPLWTSLPF HCCCCCCCCCCCCCCCHHHHCHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCHH VRRQRISVVPGVLMFGMVQEALRFSTLMVGVLETAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGGPAIARAGDANVVSLDYGLASTMLALGSVPRAIASLRNWSEWVVEPAMPSGVVDIGT CCCCCCEECCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCHHHHHCCCCCCCCCEECCC TAEINLEVLTSLRPSLILTTPFLAALDEKLSRIAPVEIFTVYAENGEALDRSYAETLRLG CCEEHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH AMIGRQREAEAYLARADATFGRLRDRMKGLSTRPVAVINFIDQRHARIYGGPGLYGGAMR HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCHHHHHH RIGIENAWKGEASYWGFQTIGLEQLAELDEEAHLVVVSPLLPPDVLTRLSESPLWTSLPF HCCCCCCCCCCCCCCCHHHHCHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCHH VRRQRISVVPGVLMFGMVQEALRFSTLMVGVLETAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301821; 2823072; 8202364; 9278503; 7651325; 10742172 [H]