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The map label for this gene is yciR [C]

Identifier: 86361180

GI number: 86361180

Start: 504098

End: 505864

Strand: Reverse

Name: yciR [C]

Synonym: RHE_PF00450

Alternate gene names: 86361180

Gene position: 505864-504098 (Counterclockwise)

Preceding gene: 86361181

Following gene: 86361170

Centisome position: 78.73

GC content: 59.37

Gene sequence:

>1767_bases
ATGCGACATTCGGGCGAACGAAATAGCGAGATCGCCTTGAGCAACAAACGATCCAGGACAAATGTCGAGCTTGAGAACCT
GCTTCGCCAGCTTGGGCTGGCCCTTGAAGCGTCCGGGATCGGGATCTGGCAGCACAACATCGCAAGAAATCAGACGCGAT
GGGATGAACAGCTCAAATTGATCTATGGCGTTCCGAAAGCGCCGCTCGATGTCATCTGGCTGGACAGTATCCATCCTGAC
GACCTGGTGGCGACAAACGAAATATTTCTGCGCGCGATCGAAACCAAATCGGATTATGCATCCGAGTTTCGCATTATTCG
CCCGGATGGCGCGATCCGCTACCTGCGTTCGCGCGCTCGTTATTTCGTCGATGCCGCCGGCGACCCGTGCTTTGTAGGCG
CCGAATGGGATGTGACGGAGGATGTGCTTCTCAACAAGGAGCTGGAGCGGAGCCGGGCAGAGGCGCGCTTCGCGGCCGAT
CACGATCACCTCACCGGCCTGTTGAACCGGCGCAGCTTCGATTTCGCCCTGTCCGAACTTGCCAGGCAGGAGAGCGTCAA
GGTTGCGCTTCTTCATATAGACGTGGACCATTTCAAGGAGATCAATGACCGCTTCGGACATGCGGTCGGCGACCTCGTGC
TCAGTCATGTCAGCAATATTCTATTGGAGGCGATCTCGGCGGGTGACTTCGCGGCACGGCTCGGCGGCGATGAGTTCGCT
GTCGTCATCACCGAGGACGAGTGTGACAGGACGATTGCGGTGCTCGATCATATTCAGAGACGTCTGGGAAGCCCGCTTCC
TGTCGGAGATCAGACGCTCATCGTGCGGTGTTCGATCGGCGTTGCGAGCGCCATGAGCGCCGATTTCGCCAGGCTGCTCT
CCCAATCCGATCTGGCGCTGTACCACGCCAAACGCAACGGCCGGAATCGGGCCGAGATTTTTTCCGACGAAATGGCTTCG
ACACTGGCGAACGAAAGGCAGCTCGCCCAGGATCTGCGGTCCGGGCTGGCGCTCGGCCAGATCCGCCCATTCTACCAGGT
GCAGGTCGACGCCAGATCTTTCCGGGTGAATGGCGTCGAAGCTCTGGCGCGGTGGCATCATCCCACCCGAGGAATTCTCG
CCCCGGCGCATTTCCTGTCCATCGCCTCGTCGAATGGATTGGTCGCAGAGCTCGACGATGTCGTTCTGAAGGCTGTTCTG
TCGGATATGAAATCCTCCGCTTCCCCGCTCAAAGGCATTCGGGTCTCCGTCAATCTCTCCGCCGATCGTCTCGACGATCC
CGAGCTGACGGCCAAGCTCGACGGCTATGACATCCCGCCCGGTCGGTTGAGTTTTGAGCTGATAGAGACGATATTCCTGG
ACAGCCTGAGTGACCAGGTGCGGCAGAACATCCAGGCCATCAAGTCCTTCGGTATCGACATCGAGATCGACGACCTCGGC
TCGGGTCACGCCTCCCTGTTGGGCCTGCTCGAGCTGCGGCCGGATCGCGTCAAGATCGATCGCCAGCTTGTGACGCCGAT
TTTGCAATCGGTGCCCAGCTGCCGGCTGGTCGGCTCATTGGTCGACATAGCGCGGGCGTTGGATATGGAAGTGATTGCCG
AAGGCGTGGAGACGCTCGAGCACGCCAACGTGCTTGCCGCGCTCGGTGTCCACACCCTCCAGGGCTATGCGTTCGGACGA
CCGCAGTCGTTTGCCGATCTGTCGGCGCGATTAGACCAGGAGATATTCGATTGCGAGCGGGCAGAAATTGTTGGGGCCGG
TCGATAA

Upstream 100 bases:

>100_bases
TCCGACGCCAGACATCGCCCGGCATTCCGCGAATTTGGGATCTGCAGCGGTCGGGTTGCCGCCGGCGGGTACTCTCGATT
AGCACTCTTTAAGATGTTCA

Downstream 100 bases:

>100_bases
CGTCGAAGCGATCGAGCGACGGCAGTTCATCGCCTGCCCTGGTGCGCGTCGCCAGAACCGCTCTAGCTTGCTTTCCAGTT
CGCATTATTGGGGATTGACC

Product: putative kinase/esterase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MRHSGERNSEIALSNKRSRTNVELENLLRQLGLALEASGIGIWQHNIARNQTRWDEQLKLIYGVPKAPLDVIWLDSIHPD
DLVATNEIFLRAIETKSDYASEFRIIRPDGAIRYLRSRARYFVDAAGDPCFVGAEWDVTEDVLLNKELERSRAEARFAAD
HDHLTGLLNRRSFDFALSELARQESVKVALLHIDVDHFKEINDRFGHAVGDLVLSHVSNILLEAISAGDFAARLGGDEFA
VVITEDECDRTIAVLDHIQRRLGSPLPVGDQTLIVRCSIGVASAMSADFARLLSQSDLALYHAKRNGRNRAEIFSDEMAS
TLANERQLAQDLRSGLALGQIRPFYQVQVDARSFRVNGVEALARWHHPTRGILAPAHFLSIASSNGLVAELDDVVLKAVL
SDMKSSASPLKGIRVSVNLSADRLDDPELTAKLDGYDIPPGRLSFELIETIFLDSLSDQVRQNIQAIKSFGIDIEIDDLG
SGHASLLGLLELRPDRVKIDRQLVTPILQSVPSCRLVGSLVDIARALDMEVIAEGVETLEHANVLAALGVHTLQGYAFGR
PQSFADLSARLDQEIFDCERAEIVGAGR

Sequences:

>Translated_588_residues
MRHSGERNSEIALSNKRSRTNVELENLLRQLGLALEASGIGIWQHNIARNQTRWDEQLKLIYGVPKAPLDVIWLDSIHPD
DLVATNEIFLRAIETKSDYASEFRIIRPDGAIRYLRSRARYFVDAAGDPCFVGAEWDVTEDVLLNKELERSRAEARFAAD
HDHLTGLLNRRSFDFALSELARQESVKVALLHIDVDHFKEINDRFGHAVGDLVLSHVSNILLEAISAGDFAARLGGDEFA
VVITEDECDRTIAVLDHIQRRLGSPLPVGDQTLIVRCSIGVASAMSADFARLLSQSDLALYHAKRNGRNRAEIFSDEMAS
TLANERQLAQDLRSGLALGQIRPFYQVQVDARSFRVNGVEALARWHHPTRGILAPAHFLSIASSNGLVAELDDVVLKAVL
SDMKSSASPLKGIRVSVNLSADRLDDPELTAKLDGYDIPPGRLSFELIETIFLDSLSDQVRQNIQAIKSFGIDIEIDDLG
SGHASLLGLLELRPDRVKIDRQLVTPILQSVPSCRLVGSLVDIARALDMEVIAEGVETLEHANVLAALGVHTLQGYAFGR
PQSFADLSARLDQEIFDCERAEIVGAGR
>Mature_588_residues
MRHSGERNSEIALSNKRSRTNVELENLLRQLGLALEASGIGIWQHNIARNQTRWDEQLKLIYGVPKAPLDVIWLDSIHPD
DLVATNEIFLRAIETKSDYASEFRIIRPDGAIRYLRSRARYFVDAAGDPCFVGAEWDVTEDVLLNKELERSRAEARFAAD
HDHLTGLLNRRSFDFALSELARQESVKVALLHIDVDHFKEINDRFGHAVGDLVLSHVSNILLEAISAGDFAARLGGDEFA
VVITEDECDRTIAVLDHIQRRLGSPLPVGDQTLIVRCSIGVASAMSADFARLLSQSDLALYHAKRNGRNRAEIFSDEMAS
TLANERQLAQDLRSGLALGQIRPFYQVQVDARSFRVNGVEALARWHHPTRGILAPAHFLSIASSNGLVAELDDVVLKAVL
SDMKSSASPLKGIRVSVNLSADRLDDPELTAKLDGYDIPPGRLSFELIETIFLDSLSDQVRQNIQAIKSFGIDIEIDDLG
SGHASLLGLLELRPDRVKIDRQLVTPILQSVPSCRLVGSLVDIARALDMEVIAEGVETLEHANVLAALGVHTLQGYAFGR
PQSFADLSARLDQEIFDCERAEIVGAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787541, Length=489, Percent_Identity=29.4478527607362, Blast_Score=193, Evalue=3e-50,
Organism=Escherichia coli, GI87081921, Length=422, Percent_Identity=27.2511848341232, Blast_Score=175, Evalue=8e-45,
Organism=Escherichia coli, GI1787055, Length=256, Percent_Identity=30.078125, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI87081845, Length=241, Percent_Identity=31.9502074688797, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1790496, Length=249, Percent_Identity=31.3253012048193, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788502, Length=232, Percent_Identity=30.1724137931034, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI87082096, Length=200, Percent_Identity=34, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI87081980, Length=250, Percent_Identity=28, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1788849, Length=363, Percent_Identity=25.8953168044077, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI87082007, Length=172, Percent_Identity=36.6279069767442, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI226510982, Length=393, Percent_Identity=25.4452926208651, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI145693134, Length=167, Percent_Identity=35.3293413173653, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI87081881, Length=207, Percent_Identity=33.8164251207729, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1786507, Length=234, Percent_Identity=27.7777777777778, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786584, Length=173, Percent_Identity=33.5260115606936, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI87081743, Length=220, Percent_Identity=27.7272727272727, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787802, Length=161, Percent_Identity=31.055900621118, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787262, Length=163, Percent_Identity=31.9018404907975, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788381, Length=194, Percent_Identity=31.4432989690722, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87081977, Length=153, Percent_Identity=36.6013071895425, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788956, Length=164, Percent_Identity=37.1951219512195, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787056, Length=149, Percent_Identity=38.9261744966443, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87081974, Length=201, Percent_Identity=26.865671641791, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1787410, Length=121, Percent_Identity=30.5785123966942, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1788085, Length=168, Percent_Identity=29.7619047619048, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1787816, Length=165, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330
- InterPro:   IPR000014
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 64971; Mature: 64971

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50113 PAC ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSGERNSEIALSNKRSRTNVELENLLRQLGLALEASGIGIWQHNIARNQTRWDEQLKL
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCEEECCCCEEEHHHHHCCCCHHHHHHHH
IYGVPKAPLDVIWLDSIHPDDLVATNEIFLRAIETKSDYASEFRIIRPDGAIRYLRSRAR
EECCCCCCEEEEEECCCCCCCCEEHHHHHHEEHHCCHHHHHCCEEECCCHHHHHHHHHHH
YFVDAAGDPCFVGAEWDVTEDVLLNKELERSRAEARFAADHDHLTGLLNRRSFDFALSEL
EEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
ARQESVKVALLHIDVDHFKEINDRFGHAVGDLVLSHVSNILLEAISAGDFAARLGGDEFA
HHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEE
VVITEDECDRTIAVLDHIQRRLGSPLPVGDQTLIVRCSIGVASAMSADFARLLSQSDLAL
EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEE
YHAKRNGRNRAEIFSDEMASTLANERQLAQDLRSGLALGQIRPFYQVQVDARSFRVNGVE
EEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEHHHEECCHHH
ALARWHHPTRGILAPAHFLSIASSNGLVAELDDVVLKAVLSDMKSSASPLKGIRVSVNLS
HHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
ADRLDDPELTAKLDGYDIPPGRLSFELIETIFLDSLSDQVRQNIQAIKSFGIDIEIDDLG
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
SGHASLLGLLELRPDRVKIDRQLVTPILQSVPSCRLVGSLVDIARALDMEVIAEGVETLE
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HANVLAALGVHTLQGYAFGRPQSFADLSARLDQEIFDCERAEIVGAGR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCC
>Mature Secondary Structure
MRHSGERNSEIALSNKRSRTNVELENLLRQLGLALEASGIGIWQHNIARNQTRWDEQLKL
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCEEECCCCEEEHHHHHCCCCHHHHHHHH
IYGVPKAPLDVIWLDSIHPDDLVATNEIFLRAIETKSDYASEFRIIRPDGAIRYLRSRAR
EECCCCCCEEEEEECCCCCCCCEEHHHHHHEEHHCCHHHHHCCEEECCCHHHHHHHHHHH
YFVDAAGDPCFVGAEWDVTEDVLLNKELERSRAEARFAADHDHLTGLLNRRSFDFALSEL
EEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
ARQESVKVALLHIDVDHFKEINDRFGHAVGDLVLSHVSNILLEAISAGDFAARLGGDEFA
HHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEE
VVITEDECDRTIAVLDHIQRRLGSPLPVGDQTLIVRCSIGVASAMSADFARLLSQSDLAL
EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEE
YHAKRNGRNRAEIFSDEMASTLANERQLAQDLRSGLALGQIRPFYQVQVDARSFRVNGVE
EEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEEHHHEECCHHH
ALARWHHPTRGILAPAHFLSIASSNGLVAELDDVVLKAVLSDMKSSASPLKGIRVSVNLS
HHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
ADRLDDPELTAKLDGYDIPPGRLSFELIETIFLDSLSDQVRQNIQAIKSFGIDIEIDDLG
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
SGHASLLGLLELRPDRVKIDRQLVTPILQSVPSCRLVGSLVDIARALDMEVIAEGVETLE
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HANVLAALGVHTLQGYAFGRPQSFADLSARLDQEIFDCERAEIVGAGR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]