| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is yieF [H]
Identifier: 86360958
GI number: 86360958
Start: 241431
End: 242003
Strand: Direct
Name: yieF [H]
Synonym: RHE_PF00228
Alternate gene names: 86360958
Gene position: 241431-242003 (Clockwise)
Preceding gene: 86360957
Following gene: 86360965
Centisome position: 37.58
GC content: 59.51
Gene sequence:
>573_bases ATGACCACGCATAAAGTAGGCTATCTTATCGGCAGCTTGGCCAAGGGCTCGATCAACCGCAAGCTCGCCAAGGCGCTGGT GCGCGTCGCCCCACCGGAACTTGAAATGTCAGAGATATCCTTCAAGGACCTGCCACTCTACAGTTACGATTACGACGCCG ATTACCCTCCGGCCGGCAGGGCATTCAAGGCGGCAATCGCGGCCGTCGACGCCGTGCTTTTCGTGACGCCCGAATACAAT CGATCCATTCCCGGCGGGCTGAAAAACGCAATCGACTGGGCGAGCCGCCCCTACGGCACCAACTCATTCACACGTAAGCC GTCGGCGGTGATCGGCACGTCGCCGGGCGCCATCGGCACAGCCGTCGCCCAGCAGAATTTGCGCAGCGTGCTCAGTTTCT GCAACTCTCCGCAGATGAATGCTCCGGAAGCCTACATCCAGTTCACTCCGGGGCTGATCACCGATGACGGCGAGGTCACG AACGAGGCCACGGCAGAATTCCTCCGCAAGTTCATGCAGGACTTCCATCTCTTCATCGCGAGGGTTCGCTCAGTGCTGCC GAAAGATGCCTAA
Upstream 100 bases:
>100_bases CGTTTATCGGCGAATAGTTGCTTGCGCCCAAAGGACAGAGACCCCGTCGAGAATTCCGCGTATGATAGGTTTTCTATCAT GCGGGATACTGGAGAACGCC
Downstream 100 bases:
>100_bases GGGCGCTTGGCATGGGATCGCGATGTTCCTACAATGCCTGCAAACTTCGCCCAGGAGCTGGCTGCCTCATTCCGGCGGCC AGCTCTGGTTTAGCGTGTAA
Product: putative NADPH:quinone reductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTTHKVGYLIGSLAKGSINRKLAKALVRVAPPELEMSEISFKDLPLYSYDYDADYPPAGRAFKAAIAAVDAVLFVTPEYN RSIPGGLKNAIDWASRPYGTNSFTRKPSAVIGTSPGAIGTAVAQQNLRSVLSFCNSPQMNAPEAYIQFTPGLITDDGEVT NEATAEFLRKFMQDFHLFIARVRSVLPKDA
Sequences:
>Translated_190_residues MTTHKVGYLIGSLAKGSINRKLAKALVRVAPPELEMSEISFKDLPLYSYDYDADYPPAGRAFKAAIAAVDAVLFVTPEYN RSIPGGLKNAIDWASRPYGTNSFTRKPSAVIGTSPGAIGTAVAQQNLRSVLSFCNSPQMNAPEAYIQFTPGLITDDGEVT NEATAEFLRKFMQDFHLFIARVRSVLPKDA >Mature_189_residues TTHKVGYLIGSLAKGSINRKLAKALVRVAPPELEMSEISFKDLPLYSYDYDADYPPAGRAFKAAIAAVDAVLFVTPEYNR SIPGGLKNAIDWASRPYGTNSFTRKPSAVIGTSPGAIGTAVAQQNLRSVLSFCNSPQMNAPEAYIQFTPGLITDDGEVTN EATAEFLRKFMQDFHLFIARVRSVLPKDA
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=187, Percent_Identity=39.0374331550802, Blast_Score=117, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20678; Mature: 20547
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHKVGYLIGSLAKGSINRKLAKALVRVAPPELEMSEISFKDLPLYSYDYDADYPPAGR CCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCCCCCCCCCCH AFKAAIAAVDAVLFVTPEYNRSIPGGLKNAIDWASRPYGTNSFTRKPSAVIGTSPGAIGT HHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHH AVAQQNLRSVLSFCNSPQMNAPEAYIQFTPGLITDDGEVTNEATAEFLRKFMQDFHLFIA HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH RVRSVLPKDA HHHHHCCCCC >Mature Secondary Structure TTHKVGYLIGSLAKGSINRKLAKALVRVAPPELEMSEISFKDLPLYSYDYDADYPPAGR CCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCCCCCCCCCCH AFKAAIAAVDAVLFVTPEYNRSIPGGLKNAIDWASRPYGTNSFTRKPSAVIGTSPGAIGT HHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHH AVAQQNLRSVLSFCNSPQMNAPEAYIQFTPGLITDDGEVTNEATAEFLRKFMQDFHLFIA HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH RVRSVLPKDA HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]