| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360957
Identifier: 86360957
GI number: 86360957
Start: 240682
End: 241347
Strand: Direct
Name: 86360957
Synonym: RHE_PF00227
Alternate gene names: NA
Gene position: 240682-241347 (Clockwise)
Preceding gene: 86360956
Following gene: 86360958
Centisome position: 37.46
GC content: 65.17
Gene sequence:
>666_bases ATGGACGTATATGAGGCAGTCACAAGCCGGAGGTCGGTGCGCGGATTTAAAGACCAGCCTGTGGCGATGGAGATACTTGA GCGCGTGCTGACCGCCGCGGCTTGGTCGCCGTCGGGATCGAACATCCAGCCGTGGAATACCTACGTGATGACCGGTGCGC CGCTGACCGAACTCAAGACGTCAGCTGTCGAGCGCGTGGCGCATGGCGAGGCCTGGGACGAGCGGCAGTATGAGATGTAC CCGTCCGTGCTGAAGCCGCCGTACGGCGAGCGCCGCTCCGCCTTCGGCAAGGAGCGCTACAGCGCGCTCGGCATTGCGCG CGAGGACTGGGAGGCGCGCCAGCGGGCAGCAATCGCCAACTGGAATTGCTTCGGCGCGCCCGCCGCCCTGTTCTGCTACA TCGACCGCGACTTGGGTCTGCCCCAATGGGCCGACGTCGGAATGTATCTGCAGACCGTGATGCTGCTACTCCGCGCCGAA GGACTGCACAGTTGCCCGCAGATGGCGTGGTCGCAGGTTCGCGAGACGGTCGCCGAGGTCCTGTCGCCGCCCGATGGGCT GATCCTCTTCTGCGGCATGTCGATCGGCTACGAAGACCCTGCGGTAAGTTACGCCCGTACGGGCCGCGCCCCGCTGGCTG AGACGGTCACGTTTATCGGCGAATAG
Upstream 100 bases:
>100_bases GTACGCCTCCTAGACCACGGTGTGATTACGCCTCCATTGCGAATGGCGATAATGAACCACATCAGGAACGGAACGAACGG CCCGGCGCATGGAGGCGGTC
Downstream 100 bases:
>100_bases TTGCTTGCGCCCAAAGGACAGAGACCCCGTCGAGAATTCCGCGTATGATAGGTTTTCTATCATGCGGGATACTGGAGAAC GCCATGACCACGCATAAAGT
Product: nitroreductase protein
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; NfnB Protein; P-Nitrobenzoate Reductase; NADH Dehydrogenase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKTSAVERVAHGEAWDERQYEMY PSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIANWNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAE GLHSCPQMAWSQVRETVAEVLSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE
Sequences:
>Translated_221_residues MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKTSAVERVAHGEAWDERQYEMY PSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIANWNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAE GLHSCPQMAWSQVRETVAEVLSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE >Mature_221_residues MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKTSAVERVAHGEAWDERQYEMY PSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIANWNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAE GLHSCPQMAWSQVRETVAEVLSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24633; Mature: 24633
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKT CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHH SAVERVAHGEAWDERQYEMYPSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIAN HHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC WNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAEGLHSCPQMAWSQVRETVAEV CCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE HCCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKT CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHH SAVERVAHGEAWDERQYEMYPSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIAN HHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC WNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAEGLHSCPQMAWSQVRETVAEV CCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE HCCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA