Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360957

Identifier: 86360957

GI number: 86360957

Start: 240682

End: 241347

Strand: Direct

Name: 86360957

Synonym: RHE_PF00227

Alternate gene names: NA

Gene position: 240682-241347 (Clockwise)

Preceding gene: 86360956

Following gene: 86360958

Centisome position: 37.46

GC content: 65.17

Gene sequence:

>666_bases
ATGGACGTATATGAGGCAGTCACAAGCCGGAGGTCGGTGCGCGGATTTAAAGACCAGCCTGTGGCGATGGAGATACTTGA
GCGCGTGCTGACCGCCGCGGCTTGGTCGCCGTCGGGATCGAACATCCAGCCGTGGAATACCTACGTGATGACCGGTGCGC
CGCTGACCGAACTCAAGACGTCAGCTGTCGAGCGCGTGGCGCATGGCGAGGCCTGGGACGAGCGGCAGTATGAGATGTAC
CCGTCCGTGCTGAAGCCGCCGTACGGCGAGCGCCGCTCCGCCTTCGGCAAGGAGCGCTACAGCGCGCTCGGCATTGCGCG
CGAGGACTGGGAGGCGCGCCAGCGGGCAGCAATCGCCAACTGGAATTGCTTCGGCGCGCCCGCCGCCCTGTTCTGCTACA
TCGACCGCGACTTGGGTCTGCCCCAATGGGCCGACGTCGGAATGTATCTGCAGACCGTGATGCTGCTACTCCGCGCCGAA
GGACTGCACAGTTGCCCGCAGATGGCGTGGTCGCAGGTTCGCGAGACGGTCGCCGAGGTCCTGTCGCCGCCCGATGGGCT
GATCCTCTTCTGCGGCATGTCGATCGGCTACGAAGACCCTGCGGTAAGTTACGCCCGTACGGGCCGCGCCCCGCTGGCTG
AGACGGTCACGTTTATCGGCGAATAG

Upstream 100 bases:

>100_bases
GTACGCCTCCTAGACCACGGTGTGATTACGCCTCCATTGCGAATGGCGATAATGAACCACATCAGGAACGGAACGAACGG
CCCGGCGCATGGAGGCGGTC

Downstream 100 bases:

>100_bases
TTGCTTGCGCCCAAAGGACAGAGACCCCGTCGAGAATTCCGCGTATGATAGGTTTTCTATCATGCGGGATACTGGAGAAC
GCCATGACCACGCATAAAGT

Product: nitroreductase protein

Products: NA

Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; NfnB Protein; P-Nitrobenzoate Reductase; NADH Dehydrogenase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Nitrobenzoate Reductase

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKTSAVERVAHGEAWDERQYEMY
PSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIANWNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAE
GLHSCPQMAWSQVRETVAEVLSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE

Sequences:

>Translated_221_residues
MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKTSAVERVAHGEAWDERQYEMY
PSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIANWNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAE
GLHSCPQMAWSQVRETVAEVLSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE
>Mature_221_residues
MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKTSAVERVAHGEAWDERQYEMY
PSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIANWNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAE
GLHSCPQMAWSQVRETVAEVLSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24633; Mature: 24633

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKT
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHH
SAVERVAHGEAWDERQYEMYPSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIAN
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
WNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAEGLHSCPQMAWSQVRETVAEV
CCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE
HCCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDVYEAVTSRRSVRGFKDQPVAMEILERVLTAAAWSPSGSNIQPWNTYVMTGAPLTELKT
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHH
SAVERVAHGEAWDERQYEMYPSVLKPPYGERRSAFGKERYSALGIAREDWEARQRAAIAN
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
WNCFGAPAALFCYIDRDLGLPQWADVGMYLQTVMLLLRAEGLHSCPQMAWSQVRETVAEV
CCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LSPPDGLILFCGMSIGYEDPAVSYARTGRAPLAETVTFIGE
HCCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA