| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360851
Identifier: 86360851
GI number: 86360851
Start: 125727
End: 126500
Strand: Direct
Name: 86360851
Synonym: RHE_PF00118
Alternate gene names: NA
Gene position: 125727-126500 (Clockwise)
Preceding gene: 86360849
Following gene: 86360854
Centisome position: 19.57
GC content: 57.24
Gene sequence:
>774_bases GTGCCCCAGTTCCCCCGTTTTGAAAATCAGTTACTCGCTCGCCTCCCTGCCGACGAGTTGTCCGCAGTCATCCCCCACCT TGAGCCAATCGAGCTTCCCCTCGCCTTCCTTATCGTTTCCGCGCGTCAGAAAATCGAGCACGTCTACTTCCTTGAAAGCG GCCTGGGCTCGATCGTTACCGTTTCCCCCAAGGGTCGAAAGGCGGAAGCGGGGATGTTTGGTCGTGAAGGATTTGCGCCC ACGCCTCCCGCTGTCGGATTTGGTTTAAGCCTGAATGAGGTGGTCGTACAGTCTCCAGGAAAGGGCTACCGCATCGAGAT TGGATCGTTCAGCAAACTACGGGAGGACTGCATTATCTTCACGAGCTTGCTTAACCGCTGCTCGCATAACCTGTCTACGC AGGTTTCCTACACGGCACTATCGAACGGAATTCACAAGGTTGACGTTCGGCTGGCCCGCTGGCTCCTGATGTGCAACGAT CGCCTCGGCGGCCACGAGATTGTCATTACCCACGACTACATCGCGCTGATGCTTGCCGTGAGACGTCCGAGCGTCACCGA TGCTCTTCACGTTCTTGAGGGCAAGGGCTTTATCAAGTCAGAGCGGAAACGCATTACGGTGCGCAACCGCCGCGCTATGG AAGAGTTCGCTTCGGATGCCTACGGCGGACCTGAAGAAGAATACCGGCTCCTCTTCGGCGCTCCGTTAGCCCACAACGCG GCGACGATGGTGGAACACCGAGCAGAACCGAGGCTCCCTATATCATCGCGCTAA
Upstream 100 bases:
>100_bases GGCTGGTGTAGTTCTGGTACAGTTCCTTATCGTTCGCTGATCTTTAGGGCGCGGACGGCAGGGAGATCACAGCTCTTGCC CCAAGTTAAGAGCTGCCTCT
Downstream 100 bases:
>100_bases CCAGACCGAAGCCGGTCTGGTTCATGCCAGGAAGATCTCAGTCCGAATACAACGCCAAAGGCTTTCATCAACAGCATCTC GTTTAAGCCTCCGAAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MPQFPRFENQLLARLPADELSAVIPHLEPIELPLAFLIVSARQKIEHVYFLESGLGSIVTVSPKGRKAEAGMFGREGFAP TPPAVGFGLSLNEVVVQSPGKGYRIEIGSFSKLREDCIIFTSLLNRCSHNLSTQVSYTALSNGIHKVDVRLARWLLMCND RLGGHEIVITHDYIALMLAVRRPSVTDALHVLEGKGFIKSERKRITVRNRRAMEEFASDAYGGPEEEYRLLFGAPLAHNA ATMVEHRAEPRLPISSR
Sequences:
>Translated_257_residues MPQFPRFENQLLARLPADELSAVIPHLEPIELPLAFLIVSARQKIEHVYFLESGLGSIVTVSPKGRKAEAGMFGREGFAP TPPAVGFGLSLNEVVVQSPGKGYRIEIGSFSKLREDCIIFTSLLNRCSHNLSTQVSYTALSNGIHKVDVRLARWLLMCND RLGGHEIVITHDYIALMLAVRRPSVTDALHVLEGKGFIKSERKRITVRNRRAMEEFASDAYGGPEEEYRLLFGAPLAHNA ATMVEHRAEPRLPISSR >Mature_256_residues PQFPRFENQLLARLPADELSAVIPHLEPIELPLAFLIVSARQKIEHVYFLESGLGSIVTVSPKGRKAEAGMFGREGFAPT PPAVGFGLSLNEVVVQSPGKGYRIEIGSFSKLREDCIIFTSLLNRCSHNLSTQVSYTALSNGIHKVDVRLARWLLMCNDR LGGHEIVITHDYIALMLAVRRPSVTDALHVLEGKGFIKSERKRITVRNRRAMEEFASDAYGGPEEEYRLLFGAPLAHNAA TMVEHRAEPRLPISSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28583; Mature: 28452
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQFPRFENQLLARLPADELSAVIPHLEPIELPLAFLIVSARQKIEHVYFLESGLGSIVT CCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEE VSPKGRKAEAGMFGREGFAPTPPAVGFGLSLNEVVVQSPGKGYRIEIGSFSKLREDCIIF ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCEEEEECCHHHHHHHHHHH TSLLNRCSHNLSTQVSYTALSNGIHKVDVRLARWLLMCNDRLGGHEIVITHDYIALMLAV HHHHHHHCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH RRPSVTDALHVLEGKGFIKSERKRITVRNRRAMEEFASDAYGGPEEEYRLLFGAPLAHNA CCCCHHHHHHHHCCCCCHHCHHHEEEHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCH ATMVEHRAEPRLPISSR HHHHHHCCCCCCCCCCC >Mature Secondary Structure PQFPRFENQLLARLPADELSAVIPHLEPIELPLAFLIVSARQKIEHVYFLESGLGSIVT CCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEE VSPKGRKAEAGMFGREGFAPTPPAVGFGLSLNEVVVQSPGKGYRIEIGSFSKLREDCIIF ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCEEEEECCHHHHHHHHHHH TSLLNRCSHNLSTQVSYTALSNGIHKVDVRLARWLLMCNDRLGGHEIVITHDYIALMLAV HHHHHHHCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH RRPSVTDALHVLEGKGFIKSERKRITVRNRRAMEEFASDAYGGPEEEYRLLFGAPLAHNA CCCCHHHHHHHHCCCCCHHCHHHEEEHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCH ATMVEHRAEPRLPISSR HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA