| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is htpG
Identifier: 86360854
GI number: 86360854
Start: 129436
End: 131328
Strand: Direct
Name: htpG
Synonym: RHE_PF00122
Alternate gene names: 86360854
Gene position: 129436-131328 (Clockwise)
Preceding gene: 86360851
Following gene: 86360855
Centisome position: 20.15
GC content: 58.27
Gene sequence:
>1893_bases ATGACGACAACTGTCGAACAGACCGCTGAAAGCCACGTCTTTGAGGCCGATGTTGCCCGCCTTTTGCATATGATGGTCCA CTCCGTTTATTCGGACAAGGGCGTTTTCCTGCGCGAATTGATCTCGAATGGCGCCGATGCCTGCGAGAAGCTGCGCTATG AGGCGATCGAGACGCCTTCGCTACTGGCAGCCGATGCCGAGAGCCGCATCATGCTGCGGCTTGACGAAGAGAGCCGGCAG CTTGTCGTGGAGGACAACGGCATCGGGATGCGGCGTGACGAGATGATTGAGGCGCTCGGCACGATTGCGAGGTCGGGGAC GCGGGCGTTCATGGAGCGTATTGCAGAGAACAAGGCCGCCGAAGGCGCACAATTCATCGGACAGTTCGGCGTCGGCTTCT ATTCCTGCTTTATGGTCGCCGAGCATGTCGATGTGATTTCCCGTCGCGCCGGCTCAGAAGAGGCGTGGAAATGGTCCTCG GACGGGAAGGGAAGCTATAGTGTCGAGGCAGCAAACCTCGTCGAAGCGCCAGCCCGCGGCACGCGCATCGTCCTGCATCT GATGGAGGATGCCAAGACATACACCTCAAGGTGGACCGTCGAACGAATCGTCAAAGAACAATCCGGTCATGTCCCGGTCG CGATCCGCATTGTGGACAAACCTGGTGGCGAGCCGGTCCAGATAACGGACGGGACTGCGCTGTGGACCAAATCGAAGAGC GAAGTCAGCAAGGAAGACTATACCGACTTCTACCGCGGCCTATCTGGGCAATACGACGAACCGGCGCTCACTGTGCACTT TCGTGCCGAGGGGCGGCACGAATACACAGCCCTGGCGTTTGTACCGGGAACGCAGCCGTTCGACATGTTTGATCCGGAAC GCAAAGGAAGGATGAAGCTTTACGTCAAGCGGGTCTTCATCACCGACGATGCGGAACTGATGCCCAGATATCTGCGCTTC GTTCGAGGGCTGATCGATACGGCTGACCTGCCGCTCAACGTGTCTCGCGAGATGATCCAGGAGAGCCCCATCCTGGCGGC AATCCGCAAGGGTGTCACCAATAGGGTTATCACAGCGATCGAGAAACTGGCTGACGGCGAGTCGGAGACCTATCTCACGT TCTGGAAGAATTTCGGACCCGTCTTGAAGGAGGGCATCTACGAGGATTACGAGCGGCGCGCACAATTGATGGCGCTTGCA CGATTTCACACGTCGGCATCGCCGGAAGGGCACCGTTCACTTGCCGAATACGTCAAAGACGCCAAAGAAGGCCAGGACGC CATCTACTATCTTGCGGGTGGCAGTCTGGACCAGTTGAAGGCGTCGCCACAGCTCGAAGGTTTCCGCGCGCGAGGCATCG AAGTGCTGCTGCTGACCGACTCAGTCGACAGCTTCTGGGTGGTGAACGCGCCGGAATTCGAAGGGAAGGCGTTCAAATCG ATCACGCAGGGAACTGCGGATCTGGCGCAGTTTCCAAGGCTCGACAATCAAACGCCACCGGAACAGGACAGCGCCGGTTT GGCGACATTTATTGGCTTCGCAAGAGAAAAACTGGCCGGTCAAGTCGCCGATGTTCGGGCATCCGACCGCTTGACGGAGA GCGCGGTCTGCCTGGTTGCGCCGGAGGACGGCTATGACAGGCAGATGGAAAAGATCCTGCAAAACGCAGGTCGTCTCCAG GGAGCCACCAAACCGATCCTCGAAATCAACTTGGCACATCCCGTGATTAAAGCCATCGCGGCCGTCGAGGACGACGCGTC TTATCAAGAGGACGCAACGTTCCTGTTGCTCGATCAAGCGCGAATTCTCGATGGCGAACGGCCACAAGATCCCCGAAAAT TCGCGCAACGGCTGGCGAGGGTTTTCGAGAGGTCAGTGCGGTCGGAAGGTTAG
Upstream 100 bases:
>100_bases TATATTTCGGCCGCGGCCAGCTGTTTTCGGATCTTGAATTTTGAGCCTGGTTTCGCCAATTGATCGGCGCAAATTGCATT TCTTTGGAGAATCCGAGCAC
Downstream 100 bases:
>100_bases CCTGTTCACGCATTGCTTACCGCTCGACTGGCGGTCTCGCTGCTCAAACCCGCTCGGCTCCATGTCAGGAGCCGAGCCTT CCCGGCCCCCATGGCCAAAG
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 630; Mature: 629
Protein sequence:
>630_residues MTTTVEQTAESHVFEADVARLLHMMVHSVYSDKGVFLRELISNGADACEKLRYEAIETPSLLAADAESRIMLRLDEESRQ LVVEDNGIGMRRDEMIEALGTIARSGTRAFMERIAENKAAEGAQFIGQFGVGFYSCFMVAEHVDVISRRAGSEEAWKWSS DGKGSYSVEAANLVEAPARGTRIVLHLMEDAKTYTSRWTVERIVKEQSGHVPVAIRIVDKPGGEPVQITDGTALWTKSKS EVSKEDYTDFYRGLSGQYDEPALTVHFRAEGRHEYTALAFVPGTQPFDMFDPERKGRMKLYVKRVFITDDAELMPRYLRF VRGLIDTADLPLNVSREMIQESPILAAIRKGVTNRVITAIEKLADGESETYLTFWKNFGPVLKEGIYEDYERRAQLMALA RFHTSASPEGHRSLAEYVKDAKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKS ITQGTADLAQFPRLDNQTPPEQDSAGLATFIGFAREKLAGQVADVRASDRLTESAVCLVAPEDGYDRQMEKILQNAGRLQ GATKPILEINLAHPVIKAIAAVEDDASYQEDATFLLLDQARILDGERPQDPRKFAQRLARVFERSVRSEG
Sequences:
>Translated_630_residues MTTTVEQTAESHVFEADVARLLHMMVHSVYSDKGVFLRELISNGADACEKLRYEAIETPSLLAADAESRIMLRLDEESRQ LVVEDNGIGMRRDEMIEALGTIARSGTRAFMERIAENKAAEGAQFIGQFGVGFYSCFMVAEHVDVISRRAGSEEAWKWSS DGKGSYSVEAANLVEAPARGTRIVLHLMEDAKTYTSRWTVERIVKEQSGHVPVAIRIVDKPGGEPVQITDGTALWTKSKS EVSKEDYTDFYRGLSGQYDEPALTVHFRAEGRHEYTALAFVPGTQPFDMFDPERKGRMKLYVKRVFITDDAELMPRYLRF VRGLIDTADLPLNVSREMIQESPILAAIRKGVTNRVITAIEKLADGESETYLTFWKNFGPVLKEGIYEDYERRAQLMALA RFHTSASPEGHRSLAEYVKDAKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKS ITQGTADLAQFPRLDNQTPPEQDSAGLATFIGFAREKLAGQVADVRASDRLTESAVCLVAPEDGYDRQMEKILQNAGRLQ GATKPILEINLAHPVIKAIAAVEDDASYQEDATFLLLDQARILDGERPQDPRKFAQRLARVFERSVRSEG >Mature_629_residues TTTVEQTAESHVFEADVARLLHMMVHSVYSDKGVFLRELISNGADACEKLRYEAIETPSLLAADAESRIMLRLDEESRQL VVEDNGIGMRRDEMIEALGTIARSGTRAFMERIAENKAAEGAQFIGQFGVGFYSCFMVAEHVDVISRRAGSEEAWKWSSD GKGSYSVEAANLVEAPARGTRIVLHLMEDAKTYTSRWTVERIVKEQSGHVPVAIRIVDKPGGEPVQITDGTALWTKSKSE VSKEDYTDFYRGLSGQYDEPALTVHFRAEGRHEYTALAFVPGTQPFDMFDPERKGRMKLYVKRVFITDDAELMPRYLRFV RGLIDTADLPLNVSREMIQESPILAAIRKGVTNRVITAIEKLADGESETYLTFWKNFGPVLKEGIYEDYERRAQLMALAR FHTSASPEGHRSLAEYVKDAKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKSI TQGTADLAQFPRLDNQTPPEQDSAGLATFIGFAREKLAGQVADVRASDRLTESAVCLVAPEDGYDRQMEKILQNAGRLQG ATKPILEINLAHPVIKAIAAVEDDASYQEDATFLLLDQARILDGERPQDPRKFAQRLARVFERSVRSEG
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI155722983, Length=591, Percent_Identity=31.1336717428088, Blast_Score=303, Evalue=4e-82, Organism=Homo sapiens, GI154146191, Length=402, Percent_Identity=34.3283582089552, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI4507677, Length=417, Percent_Identity=33.5731414868106, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI20149594, Length=408, Percent_Identity=34.0686274509804, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI153792590, Length=408, Percent_Identity=33.578431372549, Blast_Score=239, Evalue=7e-63, Organism=Escherichia coli, GI1786679, Length=626, Percent_Identity=42.332268370607, Blast_Score=483, Evalue=1e-137, Organism=Caenorhabditis elegans, GI17559162, Length=670, Percent_Identity=33.8805970149254, Blast_Score=383, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17542208, Length=676, Percent_Identity=32.8402366863905, Blast_Score=340, Evalue=1e-93, Organism=Caenorhabditis elegans, GI115535205, Length=593, Percent_Identity=30.8600337268128, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI115535167, Length=427, Percent_Identity=33.9578454332553, Blast_Score=241, Evalue=8e-64, Organism=Saccharomyces cerevisiae, GI6323840, Length=672, Percent_Identity=32.4404761904762, Blast_Score=369, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6325016, Length=677, Percent_Identity=32.2008862629247, Blast_Score=367, Evalue=1e-102, Organism=Drosophila melanogaster, GI17647529, Length=684, Percent_Identity=32.8947368421053, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI21357739, Length=687, Percent_Identity=30.8588064046579, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI24586016, Length=647, Percent_Identity=32.1483771251932, Blast_Score=313, Evalue=2e-85,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_RHIEC (Q2JZH2)
Other databases:
- EMBL: CP000138 - RefSeq: YP_472741.1 - HSSP: P07900 - ProteinModelPortal: Q2JZH2 - STRING: Q2JZH2 - GeneID: 3896287 - GenomeReviews: CP000138_GR - KEGG: ret:RHE_PF00122 - eggNOG: COG0326 - HOGENOM: HBG631012 - OMA: AIYYITA - PhylomeDB: Q2JZH2 - ProtClustDB: PRK05218 - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 70275; Mature: 70144
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTVEQTAESHVFEADVARLLHMMVHSVYSDKGVFLRELISNGADACEKLRYEAIETPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCC LLAADAESRIMLRLDEESRQLVVEDNGIGMRRDEMIEALGTIARSGTRAFMERIAENKAA HHHCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH EGAQFIGQFGVGFYSCFMVAEHVDVISRRAGSEEAWKWSSDGKGSYSVEAANLVEAPARG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCC TRIVLHLMEDAKTYTSRWTVERIVKEQSGHVPVAIRIVDKPGGEPVQITDGTALWTKSKS CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCEEEECCHH EVSKEDYTDFYRGLSGQYDEPALTVHFRAEGRHEYTALAFVPGTQPFDMFDPERKGRMKL HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEE YVKRVFITDDAELMPRYLRFVRGLIDTADLPLNVSREMIQESPILAAIRKGVTNRVITAI EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHCHHHHHHHHH EKLADGESETYLTFWKNFGPVLKEGIYEDYERRAQLMALARFHTSASPEGHRSLAEYVKD HHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKS HCCCCCEEEEEECCCHHHHCCCCCCCCHHCCCEEEEEEECCCCCEEEEECCCCCCHHHHH ITQGTADLAQFPRLDNQTPPEQDSAGLATFIGFAREKLAGQVADVRASDRLTESAVCLVA HHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE PEDGYDRQMEKILQNAGRLQGATKPILEINLAHPVIKAIAAVEDDASYQEDATFLLLDQA CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEECH RILDGERPQDPRKFAQRLARVFERSVRSEG HHCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTTVEQTAESHVFEADVARLLHMMVHSVYSDKGVFLRELISNGADACEKLRYEAIETPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCC LLAADAESRIMLRLDEESRQLVVEDNGIGMRRDEMIEALGTIARSGTRAFMERIAENKAA HHHCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH EGAQFIGQFGVGFYSCFMVAEHVDVISRRAGSEEAWKWSSDGKGSYSVEAANLVEAPARG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHCCCCC TRIVLHLMEDAKTYTSRWTVERIVKEQSGHVPVAIRIVDKPGGEPVQITDGTALWTKSKS CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCEEEECCHH EVSKEDYTDFYRGLSGQYDEPALTVHFRAEGRHEYTALAFVPGTQPFDMFDPERKGRMKL HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEE YVKRVFITDDAELMPRYLRFVRGLIDTADLPLNVSREMIQESPILAAIRKGVTNRVITAI EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHCHHHHHHHHH EKLADGESETYLTFWKNFGPVLKEGIYEDYERRAQLMALARFHTSASPEGHRSLAEYVKD HHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKS HCCCCCEEEEEECCCHHHHCCCCCCCCHHCCCEEEEEEECCCCCEEEEECCCCCCHHHHH ITQGTADLAQFPRLDNQTPPEQDSAGLATFIGFAREKLAGQVADVRASDRLTESAVCLVA HHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE PEDGYDRQMEKILQNAGRLQGATKPILEINLAHPVIKAIAAVEDDASYQEDATFLLLDQA CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEECH RILDGERPQDPRKFAQRLARVFERSVRSEG HHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA