| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is ilvH [H]
Identifier: 85860817
GI number: 85860817
Start: 2982359
End: 2982859
Strand: Direct
Name: ilvH [H]
Synonym: SYN_01712
Alternate gene names: 85860817
Gene position: 2982359-2982859 (Clockwise)
Preceding gene: 85860815
Following gene: 85860818
Centisome position: 93.81
GC content: 50.1
Gene sequence:
>501_bases ATGAGCATTGAAGAACGTACCATCACGATCCTGGTTAAAAATGAACCGGGGGTGCTGTCGCGGGTCGCGGGAGTTTTCAG CGGACGGGGATATAACATCAAGACCCTGTGCGTCGCGGAAACGACGAATCCGGAAATCTCGCGGATCACTTTAACCAGCA ATGCCGATGCGGATTTTACGGAAAAGATCAAAAAGCAGCTTGATAAACTGGTTGATGTCGTGGATGTCCTGGACTACACA GGCGAACGTTTTCTTAAAAGGGAAATGATGCTGATCGGTCTGAGAATTACCCCGGATCGCTATGCGGAACTTCTCCAGGC CGTGAACACTTTCGGATGCCGGATCATAGGTATGCAGCCGGATTATTACATCATCGAGACATCGGGCCGCCGGTCTGAAA ATGATGCAGTTTTTAAGTATTTTCAAACTTTCGATGTCGAAATGATGAACCGGACCGGTTCCATCGCCCTTCCGCGGCAC CCGCAGAAGGATTCCGCATGA
Upstream 100 bases:
>100_bases GGCAAGATCTGCTGAGAAGAAAGCGTCTGGTTTTCTTATCCGACAGGAACAAACCAGGCAGGGCGGTCACAGTGAAATCA ATAGAGGAGAAAGATCAGAA
Downstream 100 bases:
>100_bases GGACGAAGGACTCTGCAGATTCCTGGAAAGAAGAATTTTTATTTCATAAATTAACAGTCAGGGGGTATTTCTCGTGAAAC TCACCGGATCACAAGTCCTT
Product: acetolactate synthase small subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSIEERTITILVKNEPGVLSRVAGVFSGRGYNIKTLCVAETTNPEISRITLTSNADADFTEKIKKQLDKLVDVVDVLDYT GERFLKREMMLIGLRITPDRYAELLQAVNTFGCRIIGMQPDYYIIETSGRRSENDAVFKYFQTFDVEMMNRTGSIALPRH PQKDSA
Sequences:
>Translated_166_residues MSIEERTITILVKNEPGVLSRVAGVFSGRGYNIKTLCVAETTNPEISRITLTSNADADFTEKIKKQLDKLVDVVDVLDYT GERFLKREMMLIGLRITPDRYAELLQAVNTFGCRIIGMQPDYYIIETSGRRSENDAVFKYFQTFDVEMMNRTGSIALPRH PQKDSA >Mature_165_residues SIEERTITILVKNEPGVLSRVAGVFSGRGYNIKTLCVAETTNPEISRITLTSNADADFTEKIKKQLDKLVDVVDVLDYTG ERFLKREMMLIGLRITPDRYAELLQAVNTFGCRIIGMQPDYYIIETSGRRSENDAVFKYFQTFDVEMMNRTGSIALPRHP QKDSA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=155, Percent_Identity=34.8387096774194, Blast_Score=96, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6319837, Length=211, Percent_Identity=27.9620853080569, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 18834; Mature: 18703
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEERTITILVKNEPGVLSRVAGVFSGRGYNIKTLCVAETTNPEISRITLTSNADADFT CCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHH EKIKKQLDKLVDVVDVLDYTGERFLKREMMLIGLRITPDRYAELLQAVNTFGCRIIGMQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHCCEEEEECCC DYYIIETSGRRSENDAVFKYFQTFDVEMMNRTGSIALPRHPQKDSA CEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCC >Mature Secondary Structure SIEERTITILVKNEPGVLSRVAGVFSGRGYNIKTLCVAETTNPEISRITLTSNADADFT CCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHH EKIKKQLDKLVDVVDVLDYTGERFLKREMMLIGLRITPDRYAELLQAVNTFGCRIIGMQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHCCEEEEECCC DYYIIETSGRRSENDAVFKYFQTFDVEMMNRTGSIALPRHPQKDSA CEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]