| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is arsR [C]
Identifier: 85860779
GI number: 85860779
Start: 2951107
End: 2951481
Strand: Direct
Name: arsR [C]
Synonym: SYN_00341
Alternate gene names: 85860779
Gene position: 2951107-2951481 (Clockwise)
Preceding gene: 85860764
Following gene: 85860780
Centisome position: 92.82
GC content: 54.13
Gene sequence:
>375_bases ATGAACGACTTTCTGAAAGTGACCAAGGCTCTCTCCGACCCGAACCGGGTCAAAATTCTGAAGATGCTGCAGCACAAGGT CATGTGCGTCTGTGAAATCGAGGCCGCCCTGGGCATTGCCCAGCCGACGGCTTCCAAGCACTTGAAAAGACTGGAAGAGG CCGGATTGATCGATTCCCGGCGTGAAGGCAAATGGATCAACCACTATCCAGCCGACGGCAAGGACAGCCCCTATGCCGCG ACTCTGTTGGGCAATCTCCGACACTGGCTGGAAGACGACGCCGAGATACGTCAACTCATCGAAAAGATCCCTTGTATCAG ACGGGAGGAAATCTCATGCCACAAGGAAGAGGTCTGCGAAGAATCAGGATACTGA
Upstream 100 bases:
>100_bases ATGTCAACTTTTTTTAAAGATCAGCGAAAATGGAAGATTTTGCCTTGACATAGGAATTACAGCTCAATATATTTCCAGAA AAGAATATGGAGCTTCCATC
Downstream 100 bases:
>100_bases ACACATTTCCAAGCGGAAATATGATTTGACGCAGATTTCAGCATGAAGATGATTTTTGCTTCAATGTGGTGCGAGACGGT CATATGCTCAGGCAGAAGGA
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Arsenical Resistance Operon Repressor; Regulatory Protein ArsR; Regulatory Protein Arsr; Transcriptional Regulator; AsrR Family Transcriptional Regulator; Heavy Metal Resistance Transcription Regulator; ArsR Arsenic Resistance Operon Repressor
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNDFLKVTKALSDPNRVKILKMLQHKVMCVCEIEAALGIAQPTASKHLKRLEEAGLIDSRREGKWINHYPADGKDSPYAA TLLGNLRHWLEDDAEIRQLIEKIPCIRREEISCHKEEVCEESGY
Sequences:
>Translated_124_residues MNDFLKVTKALSDPNRVKILKMLQHKVMCVCEIEAALGIAQPTASKHLKRLEEAGLIDSRREGKWINHYPADGKDSPYAA TLLGNLRHWLEDDAEIRQLIEKIPCIRREEISCHKEEVCEESGY >Mature_124_residues MNDFLKVTKALSDPNRVKILKMLQHKVMCVCEIEAALGIAQPTASKHLKRLEEAGLIDSRREGKWINHYPADGKDSPYAA TLLGNLRHWLEDDAEIRQLIEKIPCIRREEISCHKEEVCEESGY
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14199; Mature: 14199
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDFLKVTKALSDPNRVKILKMLQHKVMCVCEIEAALGIAQPTASKHLKRLEEAGLIDSR CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC REGKWINHYPADGKDSPYAATLLGNLRHWLEDDAEIRQLIEKIPCIRREEISCHKEEVCE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH ESGY CCCC >Mature Secondary Structure MNDFLKVTKALSDPNRVKILKMLQHKVMCVCEIEAALGIAQPTASKHLKRLEEAGLIDSR CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC REGKWINHYPADGKDSPYAATLLGNLRHWLEDDAEIRQLIEKIPCIRREEISCHKEEVCE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH ESGY CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA