Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860742

Identifier: 85860742

GI number: 85860742

Start: 2921917

End: 2922588

Strand: Direct

Name: 85860742

Synonym: SYN_00378

Alternate gene names: NA

Gene position: 2921917-2922588 (Clockwise)

Preceding gene: 85860741

Following gene: 85860744

Centisome position: 91.9

GC content: 51.79

Gene sequence:

>672_bases
ATGAATATGCAGAAGATCCTCCTGTTTGTGAAGTATCCGGAACCGGGGAAAGTCAAAACGAGACTGGAATCCCTTCTGGA
TCAAGCCGATATAGCCCGCCTTTATTTCTGCTTCGTTATGGATTTACTGGAAACTCTGGGCGGTACGGGTTGTCTTGTGG
ATATCATCTATGATCCACCGGAAAAGGAAAGAGAAATGGCACGCCTGTTCGGGGAGGGTTATGTTTATCGGCCGCAGGAA
GGAACCGATTTAGGGGAGCGTATGAAAAATGCCTTTCAGAGTTCTTTTGCCGGGGGGATGACTTCGGTCGTGCTGATCGG
GTCCGATCTGCCGGACCTGCCACGCTCTGTCTTGCGAGAGGCTTTTTCTTCCCTGGAAACGAAGGATGGCGTTCTCGGAC
CATCCGTCGATGGCGGGTATTATCTGGTCGGCTTCCGGAAGGGAGGGTTCTTCCCTGCGGTTTTTGACGGTATTCCGTGG
AGTACGGATTTGGTCCTTTCAGAAACGATGAGGCGCTTCTCTGCCGCCGGACGAAGCATCTCTCTTCTTCCCTCGGGACG
AGATCTGGATAATCCCGAGGATCTACAGGACTTTCGACGGCGGAATATGGCATCTCACTTCGCCCGTTTCCGGACGATGA
ATTTCCTGAATCAACTCGAATTTCCTGATTGA

Upstream 100 bases:

>100_bases
TTATTGCCGCCCCCACTGCACCCATGATAGGATGGCGAAAAATTCATAAAGAGGGACGGCATATGCTCAAGGTGAACCTC
AATGCGGGTAATCTTCGAAT

Downstream 100 bases:

>100_bases
GCCCATGTGATCGATCCAGCTGAAAGATCCTGTAATTTTTCGAATCCTTTCATGGTCCATTATTCATCGGGCATCCATAA
GCGCTGGCTCCTGTCTTGAT

Product: cytoplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNMQKILLFVKYPEPGKVKTRLESLLDQADIARLYFCFVMDLLETLGGTGCLVDIIYDPPEKEREMARLFGEGYVYRPQE
GTDLGERMKNAFQSSFAGGMTSVVLIGSDLPDLPRSVLREAFSSLETKDGVLGPSVDGGYYLVGFRKGGFFPAVFDGIPW
STDLVLSETMRRFSAAGRSISLLPSGRDLDNPEDLQDFRRRNMASHFARFRTMNFLNQLEFPD

Sequences:

>Translated_223_residues
MNMQKILLFVKYPEPGKVKTRLESLLDQADIARLYFCFVMDLLETLGGTGCLVDIIYDPPEKEREMARLFGEGYVYRPQE
GTDLGERMKNAFQSSFAGGMTSVVLIGSDLPDLPRSVLREAFSSLETKDGVLGPSVDGGYYLVGFRKGGFFPAVFDGIPW
STDLVLSETMRRFSAAGRSISLLPSGRDLDNPEDLQDFRRRNMASHFARFRTMNFLNQLEFPD
>Mature_223_residues
MNMQKILLFVKYPEPGKVKTRLESLLDQADIARLYFCFVMDLLETLGGTGCLVDIIYDPPEKEREMARLFGEGYVYRPQE
GTDLGERMKNAFQSSFAGGMTSVVLIGSDLPDLPRSVLREAFSSLETKDGVLGPSVDGGYYLVGFRKGGFFPAVFDGIPW
STDLVLSETMRRFSAAGRSISLLPSGRDLDNPEDLQDFRRRNMASHFARFRTMNFLNQLEFPD

Specific function: Unknown

COG id: COG3222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25109; Mature: 25109

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMQKILLFVKYPEPGKVKTRLESLLDQADIARLYFCFVMDLLETLGGTGCLVDIIYDPP
CCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
EKEREMARLFGEGYVYRPQEGTDLGERMKNAFQSSFAGGMTSVVLIGSDLPDLPRSVLRE
HHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
AFSSLETKDGVLGPSVDGGYYLVGFRKGGFFPAVFDGIPWSTDLVLSETMRRFSAAGRSI
HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCEE
SLLPSGRDLDNPEDLQDFRRRNMASHFARFRTMNFLNQLEFPD
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNMQKILLFVKYPEPGKVKTRLESLLDQADIARLYFCFVMDLLETLGGTGCLVDIIYDPP
CCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
EKEREMARLFGEGYVYRPQEGTDLGERMKNAFQSSFAGGMTSVVLIGSDLPDLPRSVLRE
HHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
AFSSLETKDGVLGPSVDGGYYLVGFRKGGFFPAVFDGIPWSTDLVLSETMRRFSAAGRSI
HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCEE
SLLPSGRDLDNPEDLQDFRRRNMASHFARFRTMNFLNQLEFPD
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA