| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860744
Identifier: 85860744
GI number: 85860744
Start: 2922912
End: 2923658
Strand: Direct
Name: 85860744
Synonym: SYN_00376
Alternate gene names: NA
Gene position: 2922912-2923658 (Clockwise)
Preceding gene: 85860742
Following gene: 85860745
Centisome position: 91.94
GC content: 55.15
Gene sequence:
>747_bases ATGATGATGAAAGCGATATCCATGATCCTGCCATACTCAGTGATTATTCCTGTTTTCCGTGAATCGTCCTGCATAAAAGA TACGATCAGACATGTCCTTGATGTGGCGGCAGGTGCTGTCATCGAGATTATCGTGGTAGACGGGGATCTTTCTGGAGGAA CGATCCGGGAAATTCGCGACATCCGGAACGGCAGGGTGCGGAAGGTCCTGTCGGAAAAGGGGCGCGGGATGCAGCTCAAC CGGGGGGCATCCCTGGCGCAGGGGGAAATTTTACTCTTTCTTCATGCCGACACCCGCCTTCCTGAAGGGGCCTTCGATAA AATCGCCGTTTCCATGAAAGACCAGCGGATTGTGGGAGGCGCCTTCCGGCTGGCTATCGACTCCCCGCGTCTTCCCTTCC GGCTCATCGAAAAATTTGTCGCCTGTCGATCCCGTATCCTGGGAATTCCTTACGGCGATCAGGGGATCTTTGTTCGGAAG GCCGCTTTTCAGACCCTCGAAGGATTCCGGAACGTCCCTATCATGGAGGACCTGGATCTCATGCGCCGCATTCGAAGGTG CAAAGGCCGCATCGTCATCCTTGATGATCCTGTCGTCACCTCCGCCCGCCGCTGGGAACAGGAAGGGATCCTTTACTGTA CCCTGCGAAACTGGTGTCTTGTCCTGTTCTTTCTGCTAGGCGTTCCTCCGGAAAAACTTCTCAAATTTTATCCCTCCTCA CGCACTGCGCCTCCCCGCGCCCGGTAA
Upstream 100 bases:
>100_bases TGGCGTACTGCCGTTTCATAATACTGACCCTTTCCAAGCGGACAAACCCCGCACCCTTGCGTATTCGTAGCAAATCTTTT ATAAAGGGCTCAACATCATC
Downstream 100 bases:
>100_bases AGGTAGCTCCTTTCGCCTCTTCTATACTCATACCGTGAAGATTTTAGCGGCATCTCTTCCAGTCATTCCCTGCGGATTCA TGCCATACGGTTATTTTAGA
Product: cell wall biogenesis glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Family 2 Protein; Group Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferases Involved In Cell Wall Biogenesis
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRDIRNGRVRKVLSEKGRGMQLN RGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGGAFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRK AAFQTLEGFRNVPIMEDLDLMRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS RTAPPRAR
Sequences:
>Translated_248_residues MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRDIRNGRVRKVLSEKGRGMQLN RGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGGAFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRK AAFQTLEGFRNVPIMEDLDLMRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS RTAPPRAR >Mature_248_residues MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRDIRNGRVRKVLSEKGRGMQLN RGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGGAFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRK AAFQTLEGFRNVPIMEDLDLMRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS RTAPPRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28024; Mature: 28024
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRD CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH IRNGRVRKVLSEKGRGMQLNRGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGG HHCCHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHEEEECCCCEEECC AFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRKAAFQTLEGFRNVPIMEDLDL EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHH MRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS HHHHHHHCCCEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHHHHCCCC RTAPPRAR CCCCCCCC >Mature Secondary Structure MMMKAISMILPYSVIIPVFRESSCIKDTIRHVLDVAAGAVIEIIVVDGDLSGGTIREIRD CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHH IRNGRVRKVLSEKGRGMQLNRGASLAQGEILLFLHADTRLPEGAFDKIAVSMKDQRIVGG HHCCHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCHHHEEEECCCCEEECC AFRLAIDSPRLPFRLIEKFVACRSRILGIPYGDQGIFVRKAAFQTLEGFRNVPIMEDLDL EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHH MRRIRRCKGRIVILDDPVVTSARRWEQEGILYCTLRNWCLVLFFLLGVPPEKLLKFYPSS HHHHHHHCCCEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCHHHHHHHCCCC RTAPPRAR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA