Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860741

Identifier: 85860741

GI number: 85860741

Start: 2921105

End: 2921677

Strand: Direct

Name: 85860741

Synonym: SYN_00379

Alternate gene names: NA

Gene position: 2921105-2921677 (Clockwise)

Preceding gene: 85860740

Following gene: 85860742

Centisome position: 91.88

GC content: 53.93

Gene sequence:

>573_bases
GTGGTATTCCAGATCTTTCAAAGCAGGAAGAAGCGAACCGGGCAAGGAAAAAGCAAAAACCTCCAATGGATCGCCCAAAG
TCTTCGTCTCTTGCCCGATCCGGTGGTCGGCGTTATGGATAGGCCGCAAAGCAAACCGGCTGACTTCTATCGTGAATTGG
GAGAACTCTTCGGAGTGGGATTGACGCCCTTGAATCGCTATGACGGCTTCAAGGCCCTGCAAACAAAATGCAAAAATCAC
TGCCTATCCACGCTGGGCCGTCTGGTGCTGCTCATCAACGAAGCTCAGGAAGTATCGTCATCCTGTCTGACCGAACTGCG
ACTGCTGCAAAGCGCCACCTTCGATTCGGAAAGTATCCTATATACCATCCTTTGCGGCGGCGAATGTCTACCGGAACGGT
TCCGCACCCCGGAACTTCTCCCCCTGGGAAGCCGTATCCGAGTCCGACTCCAACTGGCGCCCGCTAACTCCGGAACAACT
CCGGGAATACATCAGCTTCTCCCTGGAGCAGGCCGGAAACCCACACCTGATGACCCGGGAGCTGATTCAATCCTTGATCG
AACGTTTTCTTAA

Upstream 100 bases:

>100_bases
AATAAAGAATGGTTGTCCTAACCTAAAATTGATCAGGGGCGTGGACTTGCGCTAGCCCAAAATTGACCACCCCAGAGCAC
CAGAGACCTGCTAAGAGGAT

Downstream 100 bases:

>100_bases
GGAACTTCCGCCCATTGATGGGGCACGTTGGCTGCTTGAGCGGAAATATGGCACCGTTTCTTGTTAAAGAACAAATAGTT
AAGTACATTTAGGCTTGTGC

Product: type II secretory pathway ATPase ExeA

Products: NA

Alternate protein names: ATPase; Type II Secretory Pathway ATPase ExeA; General Secretion Pathway Protein

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVGLTPLNRYDGFKALQTKCKNH
CLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESILYTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTT
PGIHQLLPGAGRKPTPDDPGADSILDRTFS

Sequences:

>Translated_190_residues
MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVGLTPLNRYDGFKALQTKCKNH
CLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESILYTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTT
PGIHQLLPGAGRKPTPDDPGADSILDRTFS
>Mature_190_residues
MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVGLTPLNRYDGFKALQTKCKNH
CLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESILYTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTT
PGIHQLLPGAGRKPTPDDPGADSILDRTFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21010; Mature: 21010

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVG
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC
LTPLNRYDGFKALQTKCKNHCLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESIL
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
YTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTTPGIHQLLPGAGRKPTPDDPG
EEEEECCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCC
ADSILDRTFS
HHHHHHHCCC
>Mature Secondary Structure
MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVG
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC
LTPLNRYDGFKALQTKCKNHCLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESIL
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
YTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTTPGIHQLLPGAGRKPTPDDPG
EEEEECCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCC
ADSILDRTFS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA