| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860741
Identifier: 85860741
GI number: 85860741
Start: 2921105
End: 2921677
Strand: Direct
Name: 85860741
Synonym: SYN_00379
Alternate gene names: NA
Gene position: 2921105-2921677 (Clockwise)
Preceding gene: 85860740
Following gene: 85860742
Centisome position: 91.88
GC content: 53.93
Gene sequence:
>573_bases GTGGTATTCCAGATCTTTCAAAGCAGGAAGAAGCGAACCGGGCAAGGAAAAAGCAAAAACCTCCAATGGATCGCCCAAAG TCTTCGTCTCTTGCCCGATCCGGTGGTCGGCGTTATGGATAGGCCGCAAAGCAAACCGGCTGACTTCTATCGTGAATTGG GAGAACTCTTCGGAGTGGGATTGACGCCCTTGAATCGCTATGACGGCTTCAAGGCCCTGCAAACAAAATGCAAAAATCAC TGCCTATCCACGCTGGGCCGTCTGGTGCTGCTCATCAACGAAGCTCAGGAAGTATCGTCATCCTGTCTGACCGAACTGCG ACTGCTGCAAAGCGCCACCTTCGATTCGGAAAGTATCCTATATACCATCCTTTGCGGCGGCGAATGTCTACCGGAACGGT TCCGCACCCCGGAACTTCTCCCCCTGGGAAGCCGTATCCGAGTCCGACTCCAACTGGCGCCCGCTAACTCCGGAACAACT CCGGGAATACATCAGCTTCTCCCTGGAGCAGGCCGGAAACCCACACCTGATGACCCGGGAGCTGATTCAATCCTTGATCG AACGTTTTCTTAA
Upstream 100 bases:
>100_bases AATAAAGAATGGTTGTCCTAACCTAAAATTGATCAGGGGCGTGGACTTGCGCTAGCCCAAAATTGACCACCCCAGAGCAC CAGAGACCTGCTAAGAGGAT
Downstream 100 bases:
>100_bases GGAACTTCCGCCCATTGATGGGGCACGTTGGCTGCTTGAGCGGAAATATGGCACCGTTTCTTGTTAAAGAACAAATAGTT AAGTACATTTAGGCTTGTGC
Product: type II secretory pathway ATPase ExeA
Products: NA
Alternate protein names: ATPase; Type II Secretory Pathway ATPase ExeA; General Secretion Pathway Protein
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVGLTPLNRYDGFKALQTKCKNH CLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESILYTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTT PGIHQLLPGAGRKPTPDDPGADSILDRTFS
Sequences:
>Translated_190_residues MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVGLTPLNRYDGFKALQTKCKNH CLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESILYTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTT PGIHQLLPGAGRKPTPDDPGADSILDRTFS >Mature_190_residues MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVGLTPLNRYDGFKALQTKCKNH CLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESILYTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTT PGIHQLLPGAGRKPTPDDPGADSILDRTFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21010; Mature: 21010
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVG CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC LTPLNRYDGFKALQTKCKNHCLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESIL CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE YTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTTPGIHQLLPGAGRKPTPDDPG EEEEECCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCC ADSILDRTFS HHHHHHHCCC >Mature Secondary Structure MVFQIFQSRKKRTGQGKSKNLQWIAQSLRLLPDPVVGVMDRPQSKPADFYRELGELFGVG CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC LTPLNRYDGFKALQTKCKNHCLSTLGRLVLLINEAQEVSSSCLTELRLLQSATFDSESIL CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE YTILCGGECLPERFRTPELLPLGSRIRVRLQLAPANSGTTPGIHQLLPGAGRKPTPDDPG EEEEECCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCC ADSILDRTFS HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA