Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860694

Identifier: 85860694

GI number: 85860694

Start: 2872413

End: 2873108

Strand: Direct

Name: 85860694

Synonym: SYN_02428

Alternate gene names: NA

Gene position: 2872413-2873108 (Clockwise)

Preceding gene: 85860693

Following gene: 85860706

Centisome position: 90.35

GC content: 53.02

Gene sequence:

>696_bases
ATGATAAAGGAGGAAAAGATGAAACGAAAAATGCTGTTCATCGGGGTCTTTATCCTTGTTTTGCTTATGGCTCTGCCGGC
AATGTCCCAGCCTCGCTACGGCTACGGCCCTGGCTATGACGATGAATACGATTCCAGTGGACAATGGACGGGGCGGGGAT
GGGGTCCTGGATATGGAATGGGGCGGGGCGGGATGATGGGTTACGGGATTTATACTTATGTGCCGCAGAAACTGCCGGTT
CCCAAGAACAAGGAGTGGATCGGAAAGTTGCGAGAGATCCTGGCGCTGGAAAAACTTTCGTTAGAGCAGTACGCCACAGA
CGCGGAGAAGTACAATACCTACATGCCTTACCATATGGTCATTCCTCAGGAGCAGGACCATGTCATGACCATCGAGCGGC
TTTTCACCGCCTACGGCCTCACAACGGATGGGAAGCCCCCGACGGTGAAAGATACGAAGACCCTTGAGGAAGCTTATCAA
CTGTGCGTAAAAATGGAACGCGACCTCATTCCACGTTATGAATGGCTGATCAGGAACGCCGAAGATCGCGACACCGCAGG
GATTCTCAACAACCTTCTGATTCAGACACGCTACCATCTTGCCATGTTCGAACACGTTTTACAGGTTGGTGGTTGGCATG
GAGGAGCTCCCTGGGGCTCGCGAGGTCGAGGCCCTGGCATGATGTGGGGTTGGTAA

Upstream 100 bases:

>100_bases
TCTGAAAAAGCGTTACGCCAGGGGTGAACTAACGAAAGAAGACTTTGACCGGATGAAACGGGAGCTTTCAGAGTAGTTAA
CTCGAAGGCCCCGAAAATCC

Downstream 100 bases:

>100_bases
AGAATTACTCACTGCCGAGCCCCTTCATCATCTCTGACAGACGGAAAATGGGTGATGAGATAAGAAAAGGCAGAGCCACA
AATGGCTCTGCCTTTTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIKEEKMKRKMLFIGVFILVLLMALPAMSQPRYGYGPGYDDEYDSSGQWTGRGWGPGYGMGRGGMMGYGIYTYVPQKLPV
PKNKEWIGKLREILALEKLSLEQYATDAEKYNTYMPYHMVIPQEQDHVMTIERLFTAYGLTTDGKPPTVKDTKTLEEAYQ
LCVKMERDLIPRYEWLIRNAEDRDTAGILNNLLIQTRYHLAMFEHVLQVGGWHGGAPWGSRGRGPGMMWGW

Sequences:

>Translated_231_residues
MIKEEKMKRKMLFIGVFILVLLMALPAMSQPRYGYGPGYDDEYDSSGQWTGRGWGPGYGMGRGGMMGYGIYTYVPQKLPV
PKNKEWIGKLREILALEKLSLEQYATDAEKYNTYMPYHMVIPQEQDHVMTIERLFTAYGLTTDGKPPTVKDTKTLEEAYQ
LCVKMERDLIPRYEWLIRNAEDRDTAGILNNLLIQTRYHLAMFEHVLQVGGWHGGAPWGSRGRGPGMMWGW
>Mature_231_residues
MIKEEKMKRKMLFIGVFILVLLMALPAMSQPRYGYGPGYDDEYDSSGQWTGRGWGPGYGMGRGGMMGYGIYTYVPQKLPV
PKNKEWIGKLREILALEKLSLEQYATDAEKYNTYMPYHMVIPQEQDHVMTIERLFTAYGLTTDGKPPTVKDTKTLEEAYQ
LCVKMERDLIPRYEWLIRNAEDRDTAGILNNLLIQTRYHLAMFEHVLQVGGWHGGAPWGSRGRGPGMMWGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26557; Mature: 26557

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEEKMKRKMLFIGVFILVLLMALPAMSQPRYGYGPGYDDEYDSSGQWTGRGWGPGYGM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRGGMMGYGIYTYVPQKLPVPKNKEWIGKLREILALEKLSLEQYATDAEKYNTYMPYHMV
CCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
IPQEQDHVMTIERLFTAYGLTTDGKPPTVKDTKTLEEAYQLCVKMERDLIPRYEWLIRNA
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC
EDRDTAGILNNLLIQTRYHLAMFEHVLQVGGWHGGAPWGSRGRGPGMMWGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIKEEKMKRKMLFIGVFILVLLMALPAMSQPRYGYGPGYDDEYDSSGQWTGRGWGPGYGM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRGGMMGYGIYTYVPQKLPVPKNKEWIGKLREILALEKLSLEQYATDAEKYNTYMPYHMV
CCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
IPQEQDHVMTIERLFTAYGLTTDGKPPTVKDTKTLEEAYQLCVKMERDLIPRYEWLIRNA
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC
EDRDTAGILNNLLIQTRYHLAMFEHVLQVGGWHGGAPWGSRGRGPGMMWGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA