Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860693

Identifier: 85860693

GI number: 85860693

Start: 2872071

End: 2872388

Strand: Direct

Name: 85860693

Synonym: SYN_02429

Alternate gene names: NA

Gene position: 2872071-2872388 (Clockwise)

Preceding gene: 85860692

Following gene: 85860694

Centisome position: 90.34

GC content: 48.43

Gene sequence:

>318_bases
GTGCATATGAAGAGGATAGTCTTGTCACTTTTTTCTTTGTTTCCAGCATTCATAACAGGTTGCGCCAAAGAGTATCCTTA
CGGTTCGGGGCCTGGCTGGGGCCATATGAGGTACTATGGTTACGGAGGCTGGTTTATGTGGATTCTGTTTCTGATTGTGA
TCGGCATCTTGCTCTACTTTGTGGTCCAGACTGCCAAAGCAAAAGGAGGAGCAGGAGTGTCGGAGGAGACTCCCCTCGAC
ATTCTGAAAAAGCGTTACGCCAGGGGTGAACTAACGAAAGAAGACTTTGACCGGATGAAACGGGAGCTTTCAGAGTAG

Upstream 100 bases:

>100_bases
TGCTCAAATTACCGATTATTCGAACAGGCAGGGCCTCTGGTACAGGGAAGTCATCTGTAGTCATTAAGTTAGATCAACTA
AATTATCTGATAATGGGTGA

Downstream 100 bases:

>100_bases
TTAACTCGAAGGCCCCGAAAATCCATGATAAAGGAGGAAAAGATGAAACGAAAAATGCTGTTCATCGGGGTCTTTATCCT
TGTTTTGCTTATGGCTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MHMKRIVLSLFSLFPAFITGCAKEYPYGSGPGWGHMRYYGYGGWFMWILFLIVIGILLYFVVQTAKAKGGAGVSEETPLD
ILKKRYARGELTKEDFDRMKRELSE

Sequences:

>Translated_105_residues
MHMKRIVLSLFSLFPAFITGCAKEYPYGSGPGWGHMRYYGYGGWFMWILFLIVIGILLYFVVQTAKAKGGAGVSEETPLD
ILKKRYARGELTKEDFDRMKRELSE
>Mature_105_residues
MHMKRIVLSLFSLFPAFITGCAKEYPYGSGPGWGHMRYYGYGGWFMWILFLIVIGILLYFVVQTAKAKGGAGVSEETPLD
ILKKRYARGELTKEDFDRMKRELSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12051; Mature: 12051

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMKRIVLSLFSLFPAFITGCAKEYPYGSGPGWGHMRYYGYGGWFMWILFLIVIGILLYF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
VVQTAKAKGGAGVSEETPLDILKKRYARGELTKEDFDRMKRELSE
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MHMKRIVLSLFSLFPAFITGCAKEYPYGSGPGWGHMRYYGYGGWFMWILFLIVIGILLYF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
VVQTAKAKGGAGVSEETPLDILKKRYARGELTKEDFDRMKRELSE
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA