Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85860654

Identifier: 85860654

GI number: 85860654

Start: 2827638

End: 2827811

Strand: Direct

Name: 85860654

Synonym: SYN_02992

Alternate gene names: NA

Gene position: 2827638-2827811 (Clockwise)

Preceding gene: 85860647

Following gene: 85860656

Centisome position: 88.94

GC content: 35.63

Gene sequence:

>174_bases
TTGAAATCGAAAGAAAACAATCTCTCTTCCGTCCCTTCGTGTCCCTCTTTTCTTTCATCCCGAAAGCGTCGCTTCTTCTC
CATCTACAGAATAATCTATCGAATATCTTATCTTTTTCTGTTTTTTCTTGACATGGCCCTTGAAATCTTTATTTTCCTAC
AAGAATTATTCTAA

Upstream 100 bases:

>100_bases
TGAATATTAATCTTTATATTACAGAATATGGTTTTGTAAATCAACTTCTCTATATGCCTCCCGGCCGTTTCCGTCGTTTA
ACGGGCGGTTTCCCTCGGCG

Downstream 100 bases:

>100_bases
CATGAAATGTTTCTACTGAAATGATCCATCATTAAACTTGGGAGGGAAAACGCCTGCAAATATCGAATATCAAGTTATGC
GCGCTTTGCGTTCTGTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MKSKENNLSSVPSCPSFLSSRKRRFFSIYRIIYRISYLFLFFLDMALEIFIFLQELF

Sequences:

>Translated_57_residues
MKSKENNLSSVPSCPSFLSSRKRRFFSIYRIIYRISYLFLFFLDMALEIFIFLQELF
>Mature_57_residues
MKSKENNLSSVPSCPSFLSSRKRRFFSIYRIIYRISYLFLFFLDMALEIFIFLQELF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6954; Mature: 6954

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKENNLSSVPSCPSFLSSRKRRFFSIYRIIYRISYLFLFFLDMALEIFIFLQELF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKSKENNLSSVPSCPSFLSSRKRRFFSIYRIIYRISYLFLFFLDMALEIFIFLQELF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA