Click here to switch to the map view.

The map label for this gene is 85860647

Identifier: 85860647

GI number: 85860647

Start: 2817390

End: 2817956

Strand: Direct

Name: 85860647

Synonym: SYN_00866

Alternate gene names: NA

Gene position: 2817390-2817956 (Clockwise)

Preceding gene: 85860644

Following gene: 85860654

Centisome position: 88.62

GC content: 53.62

Gene sequence:

>567_bases
ATGAAAAAGAAAAATATCCTGATCCCCGGTCTGGTCATTCTGATGCTGCTTGCCGTTCTCGCGGCCTGCGCGCCGGCGCG
CATTCATTCAGGCTCCAGTGCTAAAGAGATTGATTTAAACGTCGATGCCTCGCTGGACCGTTTTACTAGGGATGTCAAAG
GGGCATCTGAGTTTCTTGCGTCTGCCAAGGGTGTCCTCATTATACCCAAGGTGATCCAGGGCGGGTTTTTCGTCGGAGGG
CAGTATGGTGAAGGCGCCCTGAGAATCGGCGGGAAAACCATCGATTACTACAGCCTCGCCGGCGGCTCTTTCGGTTATCA
GATCGGAGCCCAGCAGAAGGACATCATGCTGGTCTTCATGGAGGAAGAAGCCCTGAATAAATTCCGCGCCAGCACAGGCT
GGCAGGCCGGCGTTGATGGCACGGTGGCTATGGCCAACATAGGCATCGAGGGATCCATAGATACCACAAAAATTAAAGAT
CCGATTGTCGGGTTCGTCTTCGGCCAGAAAGGTCTCATGGCAGGCGTATCGATTTCGGGCTCGAAATTCACGAAGCTGAC
ACGATAG

Upstream 100 bases:

>100_bases
TCAGTAAAGATTATTCCTGATTTGAGAATGATGCCGTCAAAATAGAAAAATTCACGCAACCAGCCGTTTCATCAAGAACC
GACAGAAAGGAGCAACCGCC

Downstream 100 bases:

>100_bases
AACCCGTCCAGGGAGGCATAAAAATACCGCCGCTGCCGGAAACTCAACCCCGACCGACTGGCACCGGAAAGGAAGAAAGG
CTGAAGGGTCAAATTTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKKKNILIPGLVILMLLAVLAACAPARIHSGSSAKEIDLNVDASLDRFTRDVKGASEFLASAKGVLIIPKVIQGGFFVGG
QYGEGALRIGGKTIDYYSLAGGSFGYQIGAQQKDIMLVFMEEEALNKFRASTGWQAGVDGTVAMANIGIEGSIDTTKIKD
PIVGFVFGQKGLMAGVSISGSKFTKLTR

Sequences:

>Translated_188_residues
MKKKNILIPGLVILMLLAVLAACAPARIHSGSSAKEIDLNVDASLDRFTRDVKGASEFLASAKGVLIIPKVIQGGFFVGG
QYGEGALRIGGKTIDYYSLAGGSFGYQIGAQQKDIMLVFMEEEALNKFRASTGWQAGVDGTVAMANIGIEGSIDTTKIKD
PIVGFVFGQKGLMAGVSISGSKFTKLTR
>Mature_188_residues
MKKKNILIPGLVILMLLAVLAACAPARIHSGSSAKEIDLNVDASLDRFTRDVKGASEFLASAKGVLIIPKVIQGGFFVGG
QYGEGALRIGGKTIDYYSLAGGSFGYQIGAQQKDIMLVFMEEEALNKFRASTGWQAGVDGTVAMANIGIEGSIDTTKIKD
PIVGFVFGQKGLMAGVSISGSKFTKLTR

Specific function: Unknown

COG id: COG2930

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19808; Mature: 19808

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNILIPGLVILMLLAVLAACAPARIHSGSSAKEIDLNVDASLDRFTRDVKGASEFLA
CCCCCEECHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
SAKGVLIIPKVIQGGFFVGGQYGEGALRIGGKTIDYYSLAGGSFGYQIGAQQKDIMLVFM
CCCCEEEEEHHHCCCEEECCCCCCCEEEECCEEEEEEEECCCCCCEEECCCCCCEEEEEE
EEEALNKFRASTGWQAGVDGTVAMANIGIEGSIDTTKIKDPIVGFVFGQKGLMAGVSISG
CHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC
SKFTKLTR
CCEEECCC
>Mature Secondary Structure
MKKKNILIPGLVILMLLAVLAACAPARIHSGSSAKEIDLNVDASLDRFTRDVKGASEFLA
CCCCCEECHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
SAKGVLIIPKVIQGGFFVGGQYGEGALRIGGKTIDYYSLAGGSFGYQIGAQQKDIMLVFM
CCCCEEEEEHHHCCCEEECCCCCCCEEEECCEEEEEEEECCCCCCEEECCCCCCEEEEEE
EEEALNKFRASTGWQAGVDGTVAMANIGIEGSIDTTKIKDPIVGFVFGQKGLMAGVSISG
CHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC
SKFTKLTR
CCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA