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The map label for this gene is 85860419

Identifier: 85860419

GI number: 85860419

Start: 2586182

End: 2586910

Strand: Direct

Name: 85860419

Synonym: SYN_00095

Alternate gene names: NA

Gene position: 2586182-2586910 (Clockwise)

Preceding gene: 85860418

Following gene: 85860422

Centisome position: 81.34

GC content: 61.59

Gene sequence:

>729_bases
ATGCTCACTTGTCCGCACAAAAGTCCGGACAGCGAACATCGAACCTGGAACATTATAAGGAGTCCCGTCTTGCCCGCTGA
AAATGATTATTCCGGCCCCTCAGCCGCCCGGCTTGACTTCGAGACCATCCGGATCGACCTGCCCCGGCAATCGATCTACC
AGCGGCTTGGCTACCGGCGGGACGCCACGCGGATCTCCCCTCAGCAGGCCGCGGAAATCGAAAACTACATGGAAGAGGCA
CGGGATCTGATCCATCTCCAGGGAACGGTCCTGCGCCTGCCGATTCGTGAGCACACTCCCGAGCGCGTCATCCTGGGCGA
TGACATTCTTTTCGAAAGCCGCAACCTTGCCCGATTTTTTGCCGGCTGCCAGGAAGCGGCGATCATGGGAGCGACGGCGG
GACCGGCGATCATGGCGGCCATCGCGGAAGACGCCGCCGGACGCAACGTCACCCGCGCCGTCGTGATGGACGCCACGGCC
AGCGAGATGGCGGATGGTGCACTGGACTGGATCATGAGCTATCTGCGCGGCATCCTCCGCAGGGAAAACAGGATGCTCCT
GCCCCGGCGCTACTCCGCAGGCTACGGCGATTTTCTTCTGGAGAATCAGCGCGTTCTTTATCGCCTCCTGCAGTTGGACC
GCTTCGGCGTCGCACTCACGGAAAGCTGCCTGCTGGTCCCCGAAAAATCCGTAACGGCCCTCACGGGAATCAGGGAAACC
GCACCGTGA

Upstream 100 bases:

>100_bases
GGTGGAAACCTTTCTCGGGGCGGAAACGGAGCTCCGGGACCGCACCCTGCGCATCCGCGGGATCGGCTACCGGAGATAAA
CGTTAAAGCTTCAACGTTAA

Downstream 100 bases:

>100_bases
AGGCCGACCCCGCCCACACCATTTTTCAGGGCGGGAACATCGATTTCTACCAGGCCTCGGGAAAGGCCATATTGGTATAG
AGATCTTCCAGTTTTGCCTT

Product: cytoplasmic protein

Products: NA

Alternate protein names: Vitamin; Cobalamin-Dependent Methionine Synthase

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MLTCPHKSPDSEHRTWNIIRSPVLPAENDYSGPSAARLDFETIRIDLPRQSIYQRLGYRRDATRISPQQAAEIENYMEEA
RDLIHLQGTVLRLPIREHTPERVILGDDILFESRNLARFFAGCQEAAIMGATAGPAIMAAIAEDAAGRNVTRAVVMDATA
SEMADGALDWIMSYLRGILRRENRMLLPRRYSAGYGDFLLENQRVLYRLLQLDRFGVALTESCLLVPEKSVTALTGIRET
AP

Sequences:

>Translated_242_residues
MLTCPHKSPDSEHRTWNIIRSPVLPAENDYSGPSAARLDFETIRIDLPRQSIYQRLGYRRDATRISPQQAAEIENYMEEA
RDLIHLQGTVLRLPIREHTPERVILGDDILFESRNLARFFAGCQEAAIMGATAGPAIMAAIAEDAAGRNVTRAVVMDATA
SEMADGALDWIMSYLRGILRRENRMLLPRRYSAGYGDFLLENQRVLYRLLQLDRFGVALTESCLLVPEKSVTALTGIRET
AP
>Mature_242_residues
MLTCPHKSPDSEHRTWNIIRSPVLPAENDYSGPSAARLDFETIRIDLPRQSIYQRLGYRRDATRISPQQAAEIENYMEEA
RDLIHLQGTVLRLPIREHTPERVILGDDILFESRNLARFFAGCQEAAIMGATAGPAIMAAIAEDAAGRNVTRAVVMDATA
SEMADGALDWIMSYLRGILRRENRMLLPRRYSAGYGDFLLENQRVLYRLLQLDRFGVALTESCLLVPEKSVTALTGIRET
AP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27188; Mature: 27188

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTCPHKSPDSEHRTWNIIRSPVLPAENDYSGPSAARLDFETIRIDLPRQSIYQRLGYRR
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHCCCC
DATRISPQQAAEIENYMEEARDLIHLQGTVLRLPIREHTPERVILGDDILFESRNLARFF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCEEEECCCCEECCCHHHHHH
AGCQEAAIMGATAGPAIMAAIAEDAAGRNVTRAVVMDATASEMADGALDWIMSYLRGILR
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEHEEECCHHHHHHHHHHHHHHHHHHHHHH
RENRMLLPRRYSAGYGDFLLENQRVLYRLLQLDRFGVALTESCLLVPEKSVTALTGIRET
HCCCEECCCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHCEEECCCCCHHHHHCHHHC
AP
CC
>Mature Secondary Structure
MLTCPHKSPDSEHRTWNIIRSPVLPAENDYSGPSAARLDFETIRIDLPRQSIYQRLGYRR
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHCCCC
DATRISPQQAAEIENYMEEARDLIHLQGTVLRLPIREHTPERVILGDDILFESRNLARFF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCEEEECCCCEECCCHHHHHH
AGCQEAAIMGATAGPAIMAAIAEDAAGRNVTRAVVMDATASEMADGALDWIMSYLRGILR
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEHEEECCHHHHHHHHHHHHHHHHHHHHHH
RENRMLLPRRYSAGYGDFLLENQRVLYRLLQLDRFGVALTESCLLVPEKSVTALTGIRET
HCCCEECCCCCCCCCCHHHHCCHHHHHHHHHHHHCCHHHHHCEEECCCCCHHHHHCHHHC
AP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA