| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860391
Identifier: 85860391
GI number: 85860391
Start: 2562149
End: 2562496
Strand: Direct
Name: 85860391
Synonym: SYN_01170
Alternate gene names: NA
Gene position: 2562149-2562496 (Clockwise)
Preceding gene: 85860390
Following gene: 85860392
Centisome position: 80.59
GC content: 56.9
Gene sequence:
>348_bases ATGCCAAGAGGTGATGGTACAGGGCCCATGGGATTGGGTCCAATGACAGGGCGTGGACTCGGATTCTGCAAGCCGGGTTA CGTAAGCGCCCCACCTGCATATGGGTTGGGAATGGGCTTTGGCCGAGGCCGCGGATTCCGGGGCGGCGGTCGAGGCTGGT GTGGCCGGTTTTTCGCTTCAGGTTTCGGGGGCTGGCTGCGGCCTGAAGGTTATTCCGCTCCGTATCAGGCACCGGATCCA AATCTTGAAAAACAGATGCTCAAGAATGAGGCAGATGCCCTGCAATCGGAGCTGAACCTCATCAAGAAGCGTCTGGAGGA TCTGGAATCCAGAAAATCTGCAGAATAA
Upstream 100 bases:
>100_bases GAAATGTCCCAAGTGTGGCGCCGCAATGGCCAGAGAATAGGTTGAAACAGAATAAAAGGAAGAAAAACAAAGATAATTAT GAATAGAGGAGGGCAAAATC
Downstream 100 bases:
>100_bases ACACGCAGAAATTACAATGACGGCCGCGCTGGTTTTTACAGGGCGGCCGCCCTGCATGTCATTCCAATTCCAGATCAAAG ATGATATCAAGACGCCAAGA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPRGDGTGPMGLGPMTGRGLGFCKPGYVSAPPAYGLGMGFGRGRGFRGGGRGWCGRFFASGFGGWLRPEGYSAPYQAPDP NLEKQMLKNEADALQSELNLIKKRLEDLESRKSAE
Sequences:
>Translated_115_residues MPRGDGTGPMGLGPMTGRGLGFCKPGYVSAPPAYGLGMGFGRGRGFRGGGRGWCGRFFASGFGGWLRPEGYSAPYQAPDP NLEKQMLKNEADALQSELNLIKKRLEDLESRKSAE >Mature_114_residues PRGDGTGPMGLGPMTGRGLGFCKPGYVSAPPAYGLGMGFGRGRGFRGGGRGWCGRFFASGFGGWLRPEGYSAPYQAPDPN LEKQMLKNEADALQSELNLIKKRLEDLESRKSAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12301; Mature: 12170
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGDGTGPMGLGPMTGRGLGFCKPGYVSAPPAYGLGMGFGRGRGFRGGGRGWCGRFFAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GFGGWLRPEGYSAPYQAPDPNLEKQMLKNEADALQSELNLIKKRLEDLESRKSAE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRGDGTGPMGLGPMTGRGLGFCKPGYVSAPPAYGLGMGFGRGRGFRGGGRGWCGRFFAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH GFGGWLRPEGYSAPYQAPDPNLEKQMLKNEADALQSELNLIKKRLEDLESRKSAE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA