| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860390
Identifier: 85860390
GI number: 85860390
Start: 2561870
End: 2562088
Strand: Direct
Name: 85860390
Synonym: SYN_01171
Alternate gene names: NA
Gene position: 2561870-2562088 (Clockwise)
Preceding gene: 85860389
Following gene: 85860391
Centisome position: 80.58
GC content: 62.1
Gene sequence:
>219_bases ATGCCAAGAGGAGACGGAACAGGACCCTTGGGAACGGGTGGCGGAGCGGGTCGAGGACGAGGCGGCCGTGGATTGGGTCG CAGAGGTGGTCCTCTTGCTGCCGGACCGGGCGGCTACTGTGTGTGCCCCGAATGCGGCCACAAGGAACCTCATCAAATAG GGTTGCCCTGTGTTCAGCAGAAATGTCCCAAGTGTGGCGCCGCAATGGCCAGAGAATAG
Upstream 100 bases:
>100_bases ACGTGCAGAACTTTGAAAATAAAAGCTGCTGAGAAAAATGAAATGAACCGGCGCGTCCGGAAAACAGAAAAATAATCTTC TCAGAGAGGAGGAGGCAGTT
Downstream 100 bases:
>100_bases GTTGAAACAGAATAAAAGGAAGAAAAACAAAGATAATTATGAATAGAGGAGGGCAAAATCATGCCAAGAGGTGATGGTAC AGGGCCCATGGGATTGGGTC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MPRGDGTGPLGTGGGAGRGRGGRGLGRRGGPLAAGPGGYCVCPECGHKEPHQIGLPCVQQKCPKCGAAMARE
Sequences:
>Translated_72_residues MPRGDGTGPLGTGGGAGRGRGGRGLGRRGGPLAAGPGGYCVCPECGHKEPHQIGLPCVQQKCPKCGAAMARE >Mature_71_residues PRGDGTGPLGTGGGAGRGRGGRGLGRRGGPLAAGPGGYCVCPECGHKEPHQIGLPCVQQKCPKCGAAMARE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7069; Mature: 6938
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 8.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGDGTGPLGTGGGAGRGRGGRGLGRRGGPLAAGPGGYCVCPECGHKEPHQIGLPCVQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHH KCPKCGAAMARE HCCCCCCCCCCC >Mature Secondary Structure PRGDGTGPLGTGGGAGRGRGGRGLGRRGGPLAAGPGGYCVCPECGHKEPHQIGLPCVQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHH KCPKCGAAMARE HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA