Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is paaY [H]

Identifier: 85860392

GI number: 85860392

Start: 2562723

End: 2563247

Strand: Direct

Name: paaY [H]

Synonym: SYN_01169

Alternate gene names: 85860392

Gene position: 2562723-2563247 (Clockwise)

Preceding gene: 85860391

Following gene: 85860393

Centisome position: 80.61

GC content: 58.48

Gene sequence:

>525_bases
ATGGCGCTTTATCAGTACGGCGACCGGATACCCAGAATCGGCAGGGACGTTTATGTCAGCGATTCCGCCCGGGTGATCGG
GGATGTCGAGATCGGAGACGGATGCTATATCGGCCATGGAGCGATCCTCCGGGGAGATTACGGCAGTATTCGACTCGGCG
CAGGAACCGCCATCGAGGAAAATGCCGTGATTCATATCCGGCCGGAGGGGTTGAGTGTCCTTGGGGAACGGGTTACCGTC
GGCCATGGGGCGATTCTCCACGGCGACCTGATCGATGATTTTGCCGTGATCGGCATGGGGGCGGTGCTCAGCCTGAACGT
GGTTGTTGGGAAATGGGCCATCGTCGGCGAAGGAACAGTTCTGCCCAGCAACACACGGATCGAGGCGGAAAAATTCGTTG
CCGGAGTTCCATGGAAGGTGATGGGAGACGTCCAGCCCCGACACAAGGAGTTCTGGACCTGGGGCAAGCAGCTCTATGTG
GACCTCGCCAAATCTTATCCGGAGAAGCTCAAGCGCCTGGATTGA

Upstream 100 bases:

>100_bases
CAACCAGAGAGAAGCCGATAGCGAAGACGGTGAAAGGTTCACTTCGATGTGGAATCGGAATGACATCATGATCTGACCAG
GCAGAGGAGGAATTTCACGT

Downstream 100 bases:

>100_bases
AGGTTCCGTTCGGGAATAATACATAAAAGAAATTGACCTTTGAAAGGAGGTCGAAATGTTTAAACTTAAATTCGATGAAA
ACCGTTGCCTGACCTGTCCG

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MALYQYGDRIPRIGRDVYVSDSARVIGDVEIGDGCYIGHGAILRGDYGSIRLGAGTAIEENAVIHIRPEGLSVLGERVTV
GHGAILHGDLIDDFAVIGMGAVLSLNVVVGKWAIVGEGTVLPSNTRIEAEKFVAGVPWKVMGDVQPRHKEFWTWGKQLYV
DLAKSYPEKLKRLD

Sequences:

>Translated_174_residues
MALYQYGDRIPRIGRDVYVSDSARVIGDVEIGDGCYIGHGAILRGDYGSIRLGAGTAIEENAVIHIRPEGLSVLGERVTV
GHGAILHGDLIDDFAVIGMGAVLSLNVVVGKWAIVGEGTVLPSNTRIEAEKFVAGVPWKVMGDVQPRHKEFWTWGKQLYV
DLAKSYPEKLKRLD
>Mature_173_residues
ALYQYGDRIPRIGRDVYVSDSARVIGDVEIGDGCYIGHGAILRGDYGSIRLGAGTAIEENAVIHIRPEGLSVLGERVTVG
HGAILHGDLIDDFAVIGMGAVLSLNVVVGKWAIVGEGTVLPSNTRIEAEKFVAGVPWKVMGDVQPRHKEFWTWGKQLYVD
LAKSYPEKLKRLD

Specific function: Phenylacetic acid aerobic catabolism. [C]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1787667, Length=174, Percent_Identity=32.7586206896552, Blast_Score=99, Evalue=1e-22,
Organism=Escherichia coli, GI87081681, Length=162, Percent_Identity=33.9506172839506, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI87082240, Length=174, Percent_Identity=31.6091954022989, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011974
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18927; Mature: 18796

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYQYGDRIPRIGRDVYVSDSARVIGDVEIGDGCYIGHGAILRGDYGSIRLGAGTAIEE
CCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCEEECCCEEEECCCCCEEECCCCEECC
NAVIHIRPEGLSVLGERVTVGHGAILHGDLIDDFAVIGMGAVLSLNVVVGKWAIVGEGTV
CCEEEECCCCHHHHCCEEEECCCEEEECCHHHHHHHHCCCHHEEEEEEEEEEEEEECCEE
LPSNTRIEAEKFVAGVPWKVMGDVQPRHKEFWTWGKQLYVDLAKSYPEKLKRLD
CCCCCCEEHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALYQYGDRIPRIGRDVYVSDSARVIGDVEIGDGCYIGHGAILRGDYGSIRLGAGTAIEE
CCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCEEECCCEEEECCCCCEEECCCCEECC
NAVIHIRPEGLSVLGERVTVGHGAILHGDLIDDFAVIGMGAVLSLNVVVGKWAIVGEGTV
CCEEEECCCCHHHHCCEEEECCCEEEECCHHHHHHHHCCCHHEEEEEEEEEEEEEECCEE
LPSNTRIEAEKFVAGVPWKVMGDVQPRHKEFWTWGKQLYVDLAKSYPEKLKRLD
CCCCCCEEHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9097039; 9278503 [H]