| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860305
Identifier: 85860305
GI number: 85860305
Start: 2488171
End: 2488380
Strand: Direct
Name: 85860305
Synonym: SYN_01227
Alternate gene names: NA
Gene position: 2488171-2488380 (Clockwise)
Preceding gene: 161347547
Following gene: 85860309
Centisome position: 78.26
GC content: 47.62
Gene sequence:
>210_bases ATGGGGGTAGCGATGAAGTCACAAGCCAGAAAAGCGAAGCGGATGGAAGCAAGGCGTCAGGAATTGCTCCGCGAAATGGA GAACCGGAAAAGGATATGGAATGCGGCAATAAATGGCGATGCCAGGGCATGCATGTTCTTATCAAAGCAATATCTGGGGA CAAAGGATGATCCAAAATTTGATGACAGGGCCATATCTTCCCTTACTTAG
Upstream 100 bases:
>100_bases AGCGTTTTAAATTATCATAATAATAATTGATTATGCACTGCCCATAAAAAACAGGTTTCAGAACCATGATCTAAACGTTT GAAACTATTCGATTCCAATC
Downstream 100 bases:
>100_bases CCGGTAAGAAAATTTTATAAAACTCAATCCTGATTTCGTGGGGAAAGAGGATTCGATTCCGGACGGCTTCAGGATAGGAC TCAACTCCCTGAGGGTAGCG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MGVAMKSQARKAKRMEARRQELLREMENRKRIWNAAINGDARACMFLSKQYLGTKDDPKFDDRAISSLT
Sequences:
>Translated_69_residues MGVAMKSQARKAKRMEARRQELLREMENRKRIWNAAINGDARACMFLSKQYLGTKDDPKFDDRAISSLT >Mature_68_residues GVAMKSQARKAKRMEARRQELLREMENRKRIWNAAINGDARACMFLSKQYLGTKDDPKFDDRAISSLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8005; Mature: 7874
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVAMKSQARKAKRMEARRQELLREMENRKRIWNAAINGDARACMFLSKQYLGTKDDPKF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC DDRAISSLT CHHHHHCCC >Mature Secondary Structure GVAMKSQARKAKRMEARRQELLREMENRKRIWNAAINGDARACMFLSKQYLGTKDDPKF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC DDRAISSLT CHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA