| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860309
Identifier: 85860309
GI number: 85860309
Start: 2490076
End: 2490771
Strand: Direct
Name: 85860309
Synonym: SYN_01231
Alternate gene names: NA
Gene position: 2490076-2490771 (Clockwise)
Preceding gene: 85860305
Following gene: 85860311
Centisome position: 78.32
GC content: 44.97
Gene sequence:
>696_bases TTGTTCCGAAATCTGATCAATGAAACACCCCCGACCGCATTGGCCGGCCCTGAGGAAAGAGAGGGAAAAATGGAAAAAAC AGCGCCGTTGGTAATAACCATCAGCCGCCAGTTGGGAGCTGGAGGGGCATATGTTGGAAAGCAACTTGCGAAAAACCTGA GTGTTTTTTATGCAGATCGTGAAATCATCGACGAGGCCGCCAAAGAGCTTTCCGTATTGAAGGAAGACCTTGAATCACAC GACGAAAAAATAAGTTCATTTTTACGGTCATTCCTGCTGTCACATGCAATCCCCCCCGTTGCCAATATTCCAAGACCAAT CAGCGGCCTGTCAGACAGTAAATTATTCAAAATCCAAAGCGAAATTATAGCGCGCATTGCTAAAGAACGTTCCGCGATTA TTATCGGACGGTGCGGCTCTTATGTCCTTCGTGACAATCCGAACCATGTCAGTATTTTTTTGCATGCTGACATGACTTTC CGACAAGGCCGCATGCAGAAGCTTCATGATGTATCAGAAGGAGAGGCCAGGGAAATGATTACCCGAAGCGACGGGGAAAG AGAGCAATATCATTATAAATTTACAGGGAAGGATTGGACGGATGCAAGACAGTATGACATTTCTATGGATACAGGGAAAA TCGGTGTTGATAAGTGCGTAGAGTGCATCATGAAATATCTGGATTTAATTCAATAG
Upstream 100 bases:
>100_bases CCTTATACTCACAATCTGAAGTCTATAAGGGATCAAACTCATCACCAGCGCACCTTATCAGAAAACCAAGGAGGGGAAAG TCGCTGAACACAGTGTCGAC
Downstream 100 bases:
>100_bases GACATGTCATTTCCGAACTGGAATTTACCGCTTATTTTTCAAGGCCTTTTCTTTCATGCCGTATTTGCCGGAAATGTTGT TTCAGTCATTCACATCGTCA
Product: cytidylate kinase
Products: NA
Alternate protein names: Biotin Carboxylase; Cytidylate Kinase Putative; Integral Membrane Protein
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADREIIDEAAKELSVLKEDLESH DEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQSEIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTF RQGRMQKLHDVSEGEAREMITRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ
Sequences:
>Translated_231_residues MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADREIIDEAAKELSVLKEDLESH DEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQSEIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTF RQGRMQKLHDVSEGEAREMITRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ >Mature_231_residues MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADREIIDEAAKELSVLKEDLESH DEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQSEIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTF RQGRMQKLHDVSEGEAREMITRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26060; Mature: 26060
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADR CCCHHHCCCCCCCCCCCCHHCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH EIIDEAAKELSVLKEDLESHDEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH EIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTFRQGRMQKLHDVSEGEAREMI HHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHH TRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ HCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADR CCCHHHCCCCCCCCCCCCHHCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH EIIDEAAKELSVLKEDLESHDEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH EIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTFRQGRMQKLHDVSEGEAREMI HHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHH TRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ HCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA