Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860309

Identifier: 85860309

GI number: 85860309

Start: 2490076

End: 2490771

Strand: Direct

Name: 85860309

Synonym: SYN_01231

Alternate gene names: NA

Gene position: 2490076-2490771 (Clockwise)

Preceding gene: 85860305

Following gene: 85860311

Centisome position: 78.32

GC content: 44.97

Gene sequence:

>696_bases
TTGTTCCGAAATCTGATCAATGAAACACCCCCGACCGCATTGGCCGGCCCTGAGGAAAGAGAGGGAAAAATGGAAAAAAC
AGCGCCGTTGGTAATAACCATCAGCCGCCAGTTGGGAGCTGGAGGGGCATATGTTGGAAAGCAACTTGCGAAAAACCTGA
GTGTTTTTTATGCAGATCGTGAAATCATCGACGAGGCCGCCAAAGAGCTTTCCGTATTGAAGGAAGACCTTGAATCACAC
GACGAAAAAATAAGTTCATTTTTACGGTCATTCCTGCTGTCACATGCAATCCCCCCCGTTGCCAATATTCCAAGACCAAT
CAGCGGCCTGTCAGACAGTAAATTATTCAAAATCCAAAGCGAAATTATAGCGCGCATTGCTAAAGAACGTTCCGCGATTA
TTATCGGACGGTGCGGCTCTTATGTCCTTCGTGACAATCCGAACCATGTCAGTATTTTTTTGCATGCTGACATGACTTTC
CGACAAGGCCGCATGCAGAAGCTTCATGATGTATCAGAAGGAGAGGCCAGGGAAATGATTACCCGAAGCGACGGGGAAAG
AGAGCAATATCATTATAAATTTACAGGGAAGGATTGGACGGATGCAAGACAGTATGACATTTCTATGGATACAGGGAAAA
TCGGTGTTGATAAGTGCGTAGAGTGCATCATGAAATATCTGGATTTAATTCAATAG

Upstream 100 bases:

>100_bases
CCTTATACTCACAATCTGAAGTCTATAAGGGATCAAACTCATCACCAGCGCACCTTATCAGAAAACCAAGGAGGGGAAAG
TCGCTGAACACAGTGTCGAC

Downstream 100 bases:

>100_bases
GACATGTCATTTCCGAACTGGAATTTACCGCTTATTTTTCAAGGCCTTTTCTTTCATGCCGTATTTGCCGGAAATGTTGT
TTCAGTCATTCACATCGTCA

Product: cytidylate kinase

Products: NA

Alternate protein names: Biotin Carboxylase; Cytidylate Kinase Putative; Integral Membrane Protein

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADREIIDEAAKELSVLKEDLESH
DEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQSEIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTF
RQGRMQKLHDVSEGEAREMITRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ

Sequences:

>Translated_231_residues
MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADREIIDEAAKELSVLKEDLESH
DEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQSEIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTF
RQGRMQKLHDVSEGEAREMITRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ
>Mature_231_residues
MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADREIIDEAAKELSVLKEDLESH
DEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQSEIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTF
RQGRMQKLHDVSEGEAREMITRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26060; Mature: 26060

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADR
CCCHHHCCCCCCCCCCCCHHCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
EIIDEAAKELSVLKEDLESHDEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
EIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTFRQGRMQKLHDVSEGEAREMI
HHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHH
TRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ
HCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRNLINETPPTALAGPEEREGKMEKTAPLVITISRQLGAGGAYVGKQLAKNLSVFYADR
CCCHHHCCCCCCCCCCCCHHCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
EIIDEAAKELSVLKEDLESHDEKISSFLRSFLLSHAIPPVANIPRPISGLSDSKLFKIQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
EIIARIAKERSAIIIGRCGSYVLRDNPNHVSIFLHADMTFRQGRMQKLHDVSEGEAREMI
HHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHH
TRSDGEREQYHYKFTGKDWTDARQYDISMDTGKIGVDKCVECIMKYLDLIQ
HCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA