Click here to switch to the map view.

The map label for this gene is wza [H]

Identifier: 85860157

GI number: 85860157

Start: 2363138

End: 2363704

Strand: Direct

Name: wza [H]

Synonym: SYN_00782

Alternate gene names: 85860157

Gene position: 2363138-2363704 (Clockwise)

Preceding gene: 85860155

Following gene: 85860158

Centisome position: 74.33

GC content: 47.8

Gene sequence:

>567_bases
ATGAAAAAAAACAGCAAAGGGATCATCTGCTGTCTGGTTTCTGTCTTGTTCGTCATTGTTGCAGGGACTGTCTTTGCTGC
GAGCAGCACATACAAAATCAGTCCTGGAGACTCTCTTGAAATTTCCGTATGGAAAGATCAAAGTCTCACCCGAACACTGG
TCGTCCCCCCGGATGGCTTCATTTCCTTCCCCCTGATCAAGGATCTGGACGTCTCCAATCTTACCGTTCCTGAACTTCGA
GACATAGTTACCAAAAAACTGGCTGCCTATGTACCCGACGCCAACGTCACGGTCATTCTTCTCCAAACCCCAAGCATGAC
AGCCTATGTCATGGGCAAGGTCAACAAGCCCGGTCAGTTTCCTATCACGACAGAAACCACCGTCCTGCAGATTCTCGCGA
TGGCGGGAGATCTGAATCCTTATGCCGCGGGCAGCAAAATTTTCGTTCTTCGTCATGAAAAGGGGAAAAGCACAAAAATC
CCCTTCGATTATAATGAAGTAAAGCGGTTTGAAAGACTTGAGCAAAATATTTACCTGAAACGCGGCGACGTCGTTGTGGT
TCCGTAA

Upstream 100 bases:

>100_bases
TGACGGTAAACTGCCGAAAAGAGCAACAAAGGCAATGCCGTAAACCGCCGCCGAAAGGCGGCTCTTAATCCTTTGAAGAC
AGATCAATAAGGAGGAATCG

Downstream 100 bases:

>100_bases
CAACCTGACATTCAAATATGTTTTCTGTACACTTTTTTTCCCCTGAGTTTCCGGACGAATTCGTTTCCATGCTCATGGTG
AAAATTTTTATGAAAGGAAT

Product: polysaccharide export periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKKNSKGIICCLVSVLFVIVAGTVFAASSTYKISPGDSLEISVWKDQSLTRTLVVPPDGFISFPLIKDLDVSNLTVPELR
DIVTKKLAAYVPDANVTVILLQTPSMTAYVMGKVNKPGQFPITTETTVLQILAMAGDLNPYAAGSKIFVLRHEKGKSTKI
PFDYNEVKRFERLEQNIYLKRGDVVVVP

Sequences:

>Translated_188_residues
MKKNSKGIICCLVSVLFVIVAGTVFAASSTYKISPGDSLEISVWKDQSLTRTLVVPPDGFISFPLIKDLDVSNLTVPELR
DIVTKKLAAYVPDANVTVILLQTPSMTAYVMGKVNKPGQFPITTETTVLQILAMAGDLNPYAAGSKIFVLRHEKGKSTKI
PFDYNEVKRFERLEQNIYLKRGDVVVVP
>Mature_188_residues
MKKNSKGIICCLVSVLFVIVAGTVFAASSTYKISPGDSLEISVWKDQSLTRTLVVPPDGFISFPLIKDLDVSNLTVPELR
DIVTKKLAAYVPDANVTVILLQTPSMTAYVMGKVNKPGQFPITTETTVLQILAMAGDLNPYAAGSKIFVLRHEKGKSTKI
PFDYNEVKRFERLEQNIYLKRGDVVVVP

Specific function: Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=174, Percent_Identity=32.7586206896552, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787218, Length=174, Percent_Identity=31.0344827586207, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 20678; Mature: 20678

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNSKGIICCLVSVLFVIVAGTVFAASSTYKISPGDSLEISVWKDQSLTRTLVVPPDGF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCC
ISFPLIKDLDVSNLTVPELRDIVTKKLAAYVPDANVTVILLQTPSMTAYVMGKVNKPGQF
EECCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCC
PITTETTVLQILAMAGDLNPYAAGSKIFVLRHEKGKSTKIPFDYNEVKRFERLEQNIYLK
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEE
RGDVVVVP
CCCEEEEC
>Mature Secondary Structure
MKKNSKGIICCLVSVLFVIVAGTVFAASSTYKISPGDSLEISVWKDQSLTRTLVVPPDGF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCC
ISFPLIKDLDVSNLTVPELRDIVTKKLAAYVPDANVTVILLQTPSMTAYVMGKVNKPGQF
EECCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCC
PITTETTVLQILAMAGDLNPYAAGSKIFVLRHEKGKSTKIPFDYNEVKRFERLEQNIYLK
CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEE
RGDVVVVP
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]