Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860158

Identifier: 85860158

GI number: 85860158

Start: 2363811

End: 2365004

Strand: Direct

Name: 85860158

Synonym: SYN_00781

Alternate gene names: NA

Gene position: 2363811-2365004 (Clockwise)

Preceding gene: 85860157

Following gene: 85860159

Centisome position: 74.35

GC content: 51.26

Gene sequence:

>1194_bases
ATGAATACAAAACACCTCCCTTCCAGCGGCCTCCGAAGCACGAGCAAGTTGTCCATTTTCATTTTGTCTCTCGTCCTGTC
CGGTTTGCTTTTAACCGGGCAAGCCCGAGCCGCGGAAAGGACGATTACTCCCTCGGTCGGGGTCAAGGCGGAGTACAATG
ACAACATTGATTTTTCTCATGGAAATGAACGGGATGATTATATCGGCACCATCAGCCCGGGCCTTAAGCTGGATTATAAA
ACCGAACGAACGGTCCTTGGCGCCATGGCAAGAATCGATGTCGTCGAATATCTGGATGAAACCGATGAAAATACCGTGAA
TCAGACATATGGCTTGAATGCCTCTCACATGCTGCTGGAAAAGCTCGGCATAAGGGCTAACGCCGGCTATATCCGCGATA
CAACCACGGACTCGTATCTGGAGGAAACCGGCTTGATTACAAGGAAATCCACGCGCCATAGTTATCGGGCTGGAGCGGGG
CTTACCTATAACCTGACCGAAATTTCGGATTTGGGTCTCGATTACGCCTATTCAAAAAGTGACTATGATGAGGAGGACAA
AGTAGACTCTACAAAAGATACCGTAAGTATGGCCTATCGTCACTTCTTTCGTGAACGCCGCGATATCGTAACGGTTACGC
CTTTCTACTCCCGTTACGACTCCGATACCAGCACCACGGACAACTACGGTCTCTCCGTGGGATTGACCCACCGCCTCCAG
GAGACCCTGGTGATGGATGTCGCACTGGGTGTCCGATACTCCGACGCGGAATACCATGATCTGGGCACAACAGATGACAA
CTGGGACTGGACGGCCAATATTGCGGCAACGAAGTCCTGGGAAACGGCGTCCGCCACCATCGGTTACGGGCGGGATCTGT
ATTACAGCGATCAGGGCGAGCCGATCAACGTGGACCGTTTTTATGCAAGAGCCAACAGAAATCTTACAGAGCGATTCGGC
GTGAGCCTGACCGGCAGTCTTTACTTCTCCAAATCCGACGATGAGGTAGGCAATGAAGATACACGTTACTGGGAAGTCAC
TCCCAGCCTTTACTACAATATAACACGGGATCACCGGCTGGAAGTGGGATACAGTTATGCCAACGATTACGACAAGACCT
TGACGGAGGACGACGAAGCGGAACGGAACAGAATCTGGGTTCTTCTGACATTCAACTTCCCCAAGACCTGGTAA

Upstream 100 bases:

>100_bases
GACATTCAAATATGTTTTCTGTACACTTTTTTTCCCCTGAGTTTCCGGACGAATTCGTTTCCATGCTCATGGTGAAAATT
TTTATGAAAGGAATGATACA

Downstream 100 bases:

>100_bases
GACAGCCACATCGTCGAGAATAAAGAAAAACAAACAAAACCCCTTTATAAAGCAAAGGTGAAGCGCCATGGAAAAGCAGA
AGGATTTTAAAGAAATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSHGNERDDYIGTISPGLKLDYK
TERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLEKLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAG
LTYNLTEISDLGLDYAYSKSDYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ
ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGEPINVDRFYARANRNLTERFG
VSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRLEVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW

Sequences:

>Translated_397_residues
MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSHGNERDDYIGTISPGLKLDYK
TERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLEKLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAG
LTYNLTEISDLGLDYAYSKSDYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ
ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGEPINVDRFYARANRNLTERFG
VSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRLEVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW
>Mature_397_residues
MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSHGNERDDYIGTISPGLKLDYK
TERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLEKLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAG
LTYNLTEISDLGLDYAYSKSDYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ
ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGEPINVDRFYARANRNLTERFG
VSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRLEVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45181; Mature: 45181

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHCCCCCCCCCEEEECCCCCCCCC
GNERDDYIGTISPGLKLDYKTERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLE
CCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHH
KLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAGLTYNLTEISDLGLDYAYSKS
HHCCCCCCCEEECCCCHHHHHHHCCEEECCCCCHHHCCCCCEEEHHHHHHCCCCEEECCC
DYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ
CCCCHHCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCCCEEEEHHHHHH
ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGE
HHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCEEEECCCCC
PINVDRFYARANRNLTERFGVSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRL
CCCHHHHHHHHCCCHHHHHCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCEE
EVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW
EEEEHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MNTKHLPSSGLRSTSKLSIFILSLVLSGLLLTGQARAAERTITPSVGVKAEYNDNIDFSH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHCCCCCCCCCEEEECCCCCCCCC
GNERDDYIGTISPGLKLDYKTERTVLGAMARIDVVEYLDETDENTVNQTYGLNASHMLLE
CCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHH
KLGIRANAGYIRDTTTDSYLEETGLITRKSTRHSYRAGAGLTYNLTEISDLGLDYAYSKS
HHCCCCCCCEEECCCCHHHHHHHCCEEECCCCCHHHCCCCCEEEHHHHHHCCCCEEECCC
DYDEEDKVDSTKDTVSMAYRHFFRERRDIVTVTPFYSRYDSDTSTTDNYGLSVGLTHRLQ
CCCCHHCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCCCEEEEHHHHHH
ETLVMDVALGVRYSDAEYHDLGTTDDNWDWTANIAATKSWETASATIGYGRDLYYSDQGE
HHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCEEEECCCCC
PINVDRFYARANRNLTERFGVSLTGSLYFSKSDDEVGNEDTRYWEVTPSLYYNITRDHRL
CCCHHHHHHHHCCCHHHHHCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCEE
EVGYSYANDYDKTLTEDDEAERNRIWVLLTFNFPKTW
EEEEHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA